Gene : LOC_Os05g28240 O. sativa v7.0
Defline:  retrotransposon protein, putative, unclassified Genomic Order:  1569
Name:  ? LOC_Os05g28240 Secondary Identifier:  ? PAC:33156299
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os05g28240 0.5kb upstream 0.5kb upstream 1787 true Chr5: 16537753-16539539 Oryza sativa
LOC_Os05g28240 0.5kb upstream 0.5kb upstream 500 false Chr5: 16539040-16539539 Oryza sativa
LOC_Os05g28240 0.5kb downstream 0.5kb downstream 1787 true Chr5: 16537253-16539039 Oryza sativa
LOC_Os05g28240 0.5kb downstream 0.5kb downstream 500 false Chr5: 16537253-16537752 Oryza sativa
LOC_Os05g28240 1.0kb upstream 1.0kb upstream 2287 true Chr5: 16537753-16540039 Oryza sativa
LOC_Os05g28240 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16539040-16540039 Oryza sativa
LOC_Os05g28240 1.0kb downstream 1.0kb downstream 2287 true Chr5: 16536753-16539039 Oryza sativa
LOC_Os05g28240 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16536753-16537752 Oryza sativa
LOC_Os05g28240 2.0kb upstream 2.0kb upstream 3287 true Chr5: 16537753-16541039 Oryza sativa
LOC_Os05g28240 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16539040-16541039 Oryza sativa
LOC_Os05g28240 2.0kb downstream 2.0kb downstream 3287 true Chr5: 16535753-16539039 Oryza sativa
LOC_Os05g28240 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16535753-16537752 Oryza sativa
LOC_Os05g28240 5.0kb upstream 5.0kb upstream 6287 true Chr5: 16537753-16544039 Oryza sativa
LOC_Os05g28240 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16539040-16544039 Oryza sativa
LOC_Os05g28240 5.0kb downstream 5.0kb downstream 6287 true Chr5: 16532753-16539039 Oryza sativa
LOC_Os05g28240 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16532753-16537752 Oryza sativa
LOC_Os05g28240 10.0kb upstream 10.0kb upstream 11287 true Chr5: 16537753-16549039 Oryza sativa
LOC_Os05g28240 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16539040-16549039 Oryza sativa
LOC_Os05g28240 10.0kb downstream 10.0kb downstream 11287 true Chr5: 16527753-16539039 Oryza sativa
LOC_Os05g28240 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16527753-16537752 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994609 5273 Angiosperm View MSA
124584928 5269 Grass View MSA
121264830 5274 Embryophyte View MSA
123303259 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain