Protein : LOC_Os05g41510.1 O. sativa v7.0

Secondary Identifier:  PAC:33159984 Organism Name:  Oryza sativa
Length:  1637   Name:  LOC_Os05g41510.1
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Proteins

11 Protein Domains

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold
IPR012337 Domain Ribonuclease H-like domain
IPR003029 Domain S1 domain
IPR027999 Domain Death-like domain of Spt6
IPR017072 Family Transcription elongation factor Spt6
IPR028231 Domain Transcription elongation factor Spt6, YqgF domain
IPR028088 Domain Helix-turn-helix DNA-binding domain of Spt6
IPR006641 Domain YqgF/RNase H-like domain
IPR000980 Domain SH2 domain
IPR010994 Domain RuvA domain 2-like
IPR028083 Domain Spt6 acidic, N-terminal domain
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
LOC_Os05g41510.1_CDS 4914   Chr5: 24301723-24309655 Oryza sativa

36 Ontology Annotations

Ontology Term Db Gene/Protein Name
SSF53098 SSF LOC_Os05g41510.1
SSF55550 SSF LOC_Os05g41510.1
SM00732 SMART LOC_Os05g41510.1
SSF158832 SSF LOC_Os05g41510.1
SSF47781 SSF LOC_Os05g41510.1
SSF50249 SSF LOC_Os05g41510.1
K11292 KEGG LOC_Os05g41510.1
3.2.1.8-RXN METACYC LOC_Os05g41510.1
PTHR10145 PANTHER LOC_Os05g41510.1
PTHR10145:SF6 PANTHER LOC_Os05g41510.1
IPR028088 InterPro LOC_Os05g41510.1
IPR028231 InterPro LOC_Os05g41510.1
PF14641 PFAM LOC_Os05g41510.1
PF14878 PFAM LOC_Os05g41510.1
PIRSF036947 PIRSF LOC_Os05g41510.1
PS50126 PROFILE LOC_Os05g41510.1
PF14632 PFAM LOC_Os05g41510.1
PF14633 PFAM LOC_Os05g41510.1
PF14635 PFAM LOC_Os05g41510.1
PF14639 PFAM LOC_Os05g41510.1
IPR000980 InterPro LOC_Os05g41510.1
IPR003029 InterPro LOC_Os05g41510.1
IPR006641 InterPro LOC_Os05g41510.1
IPR010994 InterPro LOC_Os05g41510.1
GO:0003677 GO LOC_Os05g41510.1
GO:0006139 GO LOC_Os05g41510.1
GO:0006357 GO LOC_Os05g41510.1
GO:0032784 GO LOC_Os05g41510.1
IPR027999 InterPro LOC_Os05g41510.1
IPR028083 InterPro LOC_Os05g41510.1

0 Pathway Components

0 Pathways