Gene : LOC_Os05g49880 O. sativa v7.0
Defline:  (1 of 1) PF00056//PF01073//PF02866 - lactate/malate dehydrogenase, NAD binding domain (Ldh_1_N) // 3-beta hydroxysteroid dehydrogenase/isomerase family (3Beta_HSD) // lactate/malate dehydrogenase, alpha/beta C-terminal domain (Ldh_1_C) Genomic Order:  3180
Name:  ? LOC_Os05g49880 Secondary Identifier:  ? PAC:33155881
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa GLUCONEO-PWY Oryza sativa pathologic  
Osativa GLYOXYLATE-BYPASS Oryza sativa pathologic  
Osativa PWY-5464 Oryza sativa pathologic  
Osativa PWY-561 Oryza sativa pathologic  
Osativa PWY-5690 Oryza sativa pathologic  
Osativa PWY-7115 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os05g49880 0.5kb upstream 0.5kb upstream 4491 true Chr5: 28617595-28622085 Oryza sativa
LOC_Os05g49880 0.5kb upstream 0.5kb upstream 500 false Chr5: 28621586-28622085 Oryza sativa
LOC_Os05g49880 0.5kb downstream 0.5kb downstream 4491 true Chr5: 28617095-28621585 Oryza sativa
LOC_Os05g49880 0.5kb downstream 0.5kb downstream 500 false Chr5: 28617095-28617594 Oryza sativa
LOC_Os05g49880 1.0kb upstream 1.0kb upstream 4991 true Chr5: 28617595-28622585 Oryza sativa
LOC_Os05g49880 1.0kb upstream 1.0kb upstream 1000 false Chr5: 28621586-28622585 Oryza sativa
LOC_Os05g49880 1.0kb downstream 1.0kb downstream 4991 true Chr5: 28616595-28621585 Oryza sativa
LOC_Os05g49880 1.0kb downstream 1.0kb downstream 1000 false Chr5: 28616595-28617594 Oryza sativa
LOC_Os05g49880 2.0kb upstream 2.0kb upstream 5991 true Chr5: 28617595-28623585 Oryza sativa
LOC_Os05g49880 2.0kb upstream 2.0kb upstream 2000 false Chr5: 28621586-28623585 Oryza sativa
LOC_Os05g49880 2.0kb downstream 2.0kb downstream 5991 true Chr5: 28615595-28621585 Oryza sativa
LOC_Os05g49880 2.0kb downstream 2.0kb downstream 2000 false Chr5: 28615595-28617594 Oryza sativa
LOC_Os05g49880 5.0kb upstream 5.0kb upstream 8991 true Chr5: 28617595-28626585 Oryza sativa
LOC_Os05g49880 5.0kb upstream 5.0kb upstream 5000 false Chr5: 28621586-28626585 Oryza sativa
LOC_Os05g49880 5.0kb downstream 5.0kb downstream 8991 true Chr5: 28612595-28621585 Oryza sativa
LOC_Os05g49880 5.0kb downstream 5.0kb downstream 5000 false Chr5: 28612595-28617594 Oryza sativa
LOC_Os05g49880 10.0kb upstream 10.0kb upstream 13991 true Chr5: 28617595-28631585 Oryza sativa
LOC_Os05g49880 10.0kb upstream 10.0kb upstream 10000 false Chr5: 28621586-28631585 Oryza sativa
LOC_Os05g49880 10.0kb downstream 10.0kb downstream 13991 true Chr5: 28607595-28621585 Oryza sativa
LOC_Os05g49880 10.0kb downstream 10.0kb downstream 10000 false Chr5: 28607595-28617594 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588108 5269 Grass View MSA
122042635 5273 Angiosperm View MSA
121345492 5274 Embryophyte View MSA
123423974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain