Gene : LOC_Os08g21740 O. sativa v7.0
Defline:  (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) Genomic Order:  1324
Name:  ? LOC_Os08g21740 Secondary Identifier:  ? PAC:33105750
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os08g21740 0.5kb upstream 0.5kb upstream 2167 true Chr8: 13022179-13024345 Oryza sativa
LOC_Os08g21740 0.5kb upstream 0.5kb upstream 500 false Chr8: 13022179-13022678 Oryza sativa
LOC_Os08g21740 0.5kb downstream 0.5kb downstream 2167 true Chr8: 13022679-13024845 Oryza sativa
LOC_Os08g21740 0.5kb downstream 0.5kb downstream 500 false Chr8: 13024346-13024845 Oryza sativa
LOC_Os08g21740 1.0kb upstream 1.0kb upstream 2667 true Chr8: 13021679-13024345 Oryza sativa
LOC_Os08g21740 1.0kb upstream 1.0kb upstream 1000 false Chr8: 13021679-13022678 Oryza sativa
LOC_Os08g21740 1.0kb downstream 1.0kb downstream 2667 true Chr8: 13022679-13025345 Oryza sativa
LOC_Os08g21740 1.0kb downstream 1.0kb downstream 1000 false Chr8: 13024346-13025345 Oryza sativa
LOC_Os08g21740 2.0kb upstream 2.0kb upstream 3667 true Chr8: 13020679-13024345 Oryza sativa
LOC_Os08g21740 2.0kb upstream 2.0kb upstream 2000 false Chr8: 13020679-13022678 Oryza sativa
LOC_Os08g21740 2.0kb downstream 2.0kb downstream 3667 true Chr8: 13022679-13026345 Oryza sativa
LOC_Os08g21740 2.0kb downstream 2.0kb downstream 2000 false Chr8: 13024346-13026345 Oryza sativa
LOC_Os08g21740 5.0kb upstream 5.0kb upstream 6667 true Chr8: 13017679-13024345 Oryza sativa
LOC_Os08g21740 5.0kb upstream 5.0kb upstream 5000 false Chr8: 13017679-13022678 Oryza sativa
LOC_Os08g21740 5.0kb downstream 5.0kb downstream 6667 true Chr8: 13022679-13029345 Oryza sativa
LOC_Os08g21740 5.0kb downstream 5.0kb downstream 5000 false Chr8: 13024346-13029345 Oryza sativa
LOC_Os08g21740 10.0kb upstream 10.0kb upstream 11667 true Chr8: 13012679-13024345 Oryza sativa
LOC_Os08g21740 10.0kb upstream 10.0kb upstream 10000 false Chr8: 13012679-13022678 Oryza sativa
LOC_Os08g21740 10.0kb downstream 10.0kb downstream 11667 true Chr8: 13022679-13034345 Oryza sativa
LOC_Os08g21740 10.0kb downstream 10.0kb downstream 10000 false Chr8: 13024346-13034345 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027888 5273 Angiosperm View MSA
124564734 5269 Grass View MSA
121297470 5274 Embryophyte View MSA
123335525 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain