Gene : LOC_Os08g32630 O. sativa v7.0
Defline:  (1 of 1) 5.5.1.19 - Lycopene beta-cyclase Genomic Order:  1963
Name:  ? LOC_Os08g32630 Secondary Identifier:  ? PAC:33105867
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa CAROTENOID-PWY Oryza sativa pathologic  
Osativa PWY-5943 Oryza sativa pathologic  
Osativa PWY-5947 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os08g32630 0.5kb upstream 0.5kb upstream 10478 true Chr8: 20208360-20218837 Oryza sativa
LOC_Os08g32630 0.5kb upstream 0.5kb upstream 500 false Chr8: 20208360-20208859 Oryza sativa
LOC_Os08g32630 0.5kb downstream 0.5kb downstream 10478 true Chr8: 20208860-20219337 Oryza sativa
LOC_Os08g32630 0.5kb downstream 0.5kb downstream 500 false Chr8: 20218838-20219337 Oryza sativa
LOC_Os08g32630 1.0kb upstream 1.0kb upstream 10978 true Chr8: 20207860-20218837 Oryza sativa
LOC_Os08g32630 1.0kb upstream 1.0kb upstream 1000 false Chr8: 20207860-20208859 Oryza sativa
LOC_Os08g32630 1.0kb downstream 1.0kb downstream 10978 true Chr8: 20208860-20219837 Oryza sativa
LOC_Os08g32630 1.0kb downstream 1.0kb downstream 1000 false Chr8: 20218838-20219837 Oryza sativa
LOC_Os08g32630 2.0kb upstream 2.0kb upstream 11978 true Chr8: 20206860-20218837 Oryza sativa
LOC_Os08g32630 2.0kb upstream 2.0kb upstream 2000 false Chr8: 20206860-20208859 Oryza sativa
LOC_Os08g32630 2.0kb downstream 2.0kb downstream 11978 true Chr8: 20208860-20220837 Oryza sativa
LOC_Os08g32630 2.0kb downstream 2.0kb downstream 2000 false Chr8: 20218838-20220837 Oryza sativa
LOC_Os08g32630 5.0kb upstream 5.0kb upstream 14978 true Chr8: 20203860-20218837 Oryza sativa
LOC_Os08g32630 5.0kb upstream 5.0kb upstream 5000 false Chr8: 20203860-20208859 Oryza sativa
LOC_Os08g32630 5.0kb downstream 5.0kb downstream 14978 true Chr8: 20208860-20223837 Oryza sativa
LOC_Os08g32630 5.0kb downstream 5.0kb downstream 5000 false Chr8: 20218838-20223837 Oryza sativa
LOC_Os08g32630 10.0kb upstream 10.0kb upstream 19978 true Chr8: 20198860-20218837 Oryza sativa
LOC_Os08g32630 10.0kb upstream 10.0kb upstream 10000 false Chr8: 20198860-20208859 Oryza sativa
LOC_Os08g32630 10.0kb downstream 10.0kb downstream 19978 true Chr8: 20208860-20228837 Oryza sativa
LOC_Os08g32630 10.0kb downstream 10.0kb downstream 10000 false Chr8: 20218838-20228837 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570588 5269 Grass View MSA
122042056 5273 Angiosperm View MSA
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain