PhytoMine: Gene LOC_Os08g38820 O. sativa v7.0

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20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
LOC_Os08g38820 0.5kb upstream	0.5kb	upstream	4988	true	Chr8: 24537686-24542673	Oryza sativa
LOC_Os08g38820 0.5kb upstream	0.5kb	upstream	500	false	Chr8: 24542174-24542673	Oryza sativa
LOC_Os08g38820 0.5kb downstream	0.5kb	downstream	4988	true	Chr8: 24537186-24542173	Oryza sativa
LOC_Os08g38820 0.5kb downstream	0.5kb	downstream	500	false	Chr8: 24537186-24537685	Oryza sativa
LOC_Os08g38820 1.0kb upstream	1.0kb	upstream	5488	true	Chr8: 24537686-24543173	Oryza sativa
LOC_Os08g38820 1.0kb upstream	1.0kb	upstream	1000	false	Chr8: 24542174-24543173	Oryza sativa
LOC_Os08g38820 1.0kb downstream	1.0kb	downstream	5488	true	Chr8: 24536686-24542173	Oryza sativa
LOC_Os08g38820 1.0kb downstream	1.0kb	downstream	1000	false	Chr8: 24536686-24537685	Oryza sativa
LOC_Os08g38820 2.0kb upstream	2.0kb	upstream	6488	true	Chr8: 24537686-24544173	Oryza sativa
LOC_Os08g38820 2.0kb upstream	2.0kb	upstream	2000	false	Chr8: 24542174-24544173	Oryza sativa
LOC_Os08g38820 2.0kb downstream	2.0kb	downstream	6488	true	Chr8: 24535686-24542173	Oryza sativa
LOC_Os08g38820 2.0kb downstream	2.0kb	downstream	2000	false	Chr8: 24535686-24537685	Oryza sativa
LOC_Os08g38820 5.0kb upstream	5.0kb	upstream	9488	true	Chr8: 24537686-24547173	Oryza sativa
LOC_Os08g38820 5.0kb upstream	5.0kb	upstream	5000	false	Chr8: 24542174-24547173	Oryza sativa
LOC_Os08g38820 5.0kb downstream	5.0kb	downstream	9488	true	Chr8: 24532686-24542173	Oryza sativa
LOC_Os08g38820 5.0kb downstream	5.0kb	downstream	5000	false	Chr8: 24532686-24537685	Oryza sativa
LOC_Os08g38820 10.0kb upstream	10.0kb	upstream	14488	true	Chr8: 24537686-24552173	Oryza sativa
LOC_Os08g38820 10.0kb upstream	10.0kb	upstream	10000	false	Chr8: 24542174-24552173	Oryza sativa
LOC_Os08g38820 10.0kb downstream	10.0kb	downstream	14488	true	Chr8: 24527686-24542173	Oryza sativa
LOC_Os08g38820 10.0kb downstream	10.0kb	downstream	10000	false	Chr8: 24527686-24537685	Oryza sativa

4 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
124574936	5269	Grass	View MSA
122044185	5273	Angiosperm	View MSA
121349188	5274	Embryophyte	View MSA
123426870	5275	Viridiplantae	View MSA

Defline:	(1 of 1) PTHR10766//PTHR10766:SF44 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN // ENDOMEMBRANE FAMILY PROTEIN 70	Genomic Order:	2468
Name:	LOC_Os08g38820	Secondary Identifier:	PAC:33106388

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Message:	---- Current page: ---- /phytomine/report.do?id=339657165 ---- Current query: ---- <query name="" model="genomic" view="GeneFlankingRegion.gene.primaryIdentifier GeneFlankingRegion.gene.briefDescription GeneFlankingRegion.gene.organism.shortName GeneFlankingRegion.gene.symbol GeneFlankingRegion.gene.length GeneFlankingRegion.gene.chromosome.primaryIdentifier GeneFlankingRegion.gene.chromosomeLocation.start GeneFlankingRegion.gene.chromosomeLocation.end" longDescription=""><join path="GeneFlankingRegion.gene.organism" style="OUTER"/><join path="GeneFlankingRegion.gene.chromosome" style="OUTER"/><join path="GeneFlankingRegion.gene.chromosomeLocation" style="OUTER"/><constraint path="GeneFlankingRegion.id" op="=" value="2106613036"/></query>

Gene : LOC_Os08g38820 O. sativa v7.0

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20 Flanking Regions

4 Protein Familys

0 Rna Seq Expressions

0 Strain