Protein Domain : IPR005797

Type:  Domain Name:  Cytochrome b/b6, N-terminal
Description:  In the mitochondrion of eukaryotes and in aerobic prokaryotes, cytochrome b is a component of respiratory chain complex III () - also known as the bc1 complex or ubiquinol-cytochrome c reductase. In plant chloroplasts and cyanobacteria, there is a analogous protein, cytochrome b6, a component of the plastoquinone-plastocyanin reductase (), also known as the b6f complex.Cytochrome b/b6 [, ] is an integral membrane protein of approximately 400 amino acid residues that probably has 8 transmembrane segments. In plants and cyanobacteria, cytochrome b6 consists of two subunits encoded by the petB and petD genes. The sequence of petB is colinear with the N-terminal part of mitochondrial cytochrome b, while petD corresponds to the C-terminal part.Cytochrome b/b6 non-covalently binds two haem groups, known as b562 and b566. Four conserved histidine residues are postulated to be the ligands of the iron atoms of these two haem groups.Apart from regions around some of the histidine haem ligands, there are a few conserved regions in the sequence of b/b6. The best conserved of these regions includes an invariant P-E-W triplet which lies in the loop that separates the fifth and sixth transmembrane segments. It seems to be important for electron transfer at the ubiquinone redox site - called Qz or Qo (where o stands for outside) - located on the outer side of the membrane. This entry represents the N-terminal region of these proteins. Short Name:  Cyt_b/b6_N

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF13631
PS51002

0 Found In

3 GO Annotations

GO Term Gene Name
GO:0009055 IPR005797
GO:0016491 IPR005797
GO:0016020 IPR005797

3 Ontology Annotations

GO Term Gene Name
GO:0009055 IPR005797
GO:0016491 IPR005797
GO:0016020 IPR005797

1 Parent Features

DB identifier Type Name
IPR016174 Domain Di-haem cytochrome, transmembrane

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
137714 D8TE99 PAC:15422124 Selaginella moellendorffii 275  
139134 PAC:15423451 Selaginella moellendorffii 326  
Cucsa.180050.1 PAC:16967277 Cucumis sativus 142  
ATCG00720.1 P56773 PAC:19638013 Arabidopsis thaliana 215  
ATMG00220.1 PAC:19643621 Arabidopsis thaliana 393  
AT2G07727.1 PAC:19641704 Arabidopsis thaliana 393  
Thhalv10001270m V4L773 PAC:20208999 Eutrema salsugineum 393  
Ciclev10003393m V4SDP7 PAC:20789214 Citrus clementina 128  
Potri.009G005000.1 B9HQP6 PAC:26986100 Populus trichocarpa 62  
Potri.001G188100.1 A0A2K2C006 PAC:27042130 Populus trichocarpa 109  
Potri.004G058600.1 B9H2G9 PAC:26990213 Populus trichocarpa 76  
Potri.011G113500.1 PAC:27001757 Populus trichocarpa 185  
Potri.011G074700.1 A0A2K1YGX7 PAC:27002538 Populus trichocarpa 214  
Potri.013G137300.1 PAC:26996029 Populus trichocarpa 214  
Potri.013G136700.1 A0A2K1Y5I7 PAC:26995976 Populus trichocarpa 143  
Gorai.001G132300.1 A0A0D2PQS9 PAC:26823530 Gossypium raimondii 102  
Gorai.001G162000.1 A0A0D2PSA8 PAC:26819541 Gossypium raimondii 392  
Gorai.005G137700.1 A0A0D2PSR6 PAC:26803956 Gossypium raimondii 173  
Gorai.009G308600.1 A0A0D2UWL1 PAC:26765122 Gossypium raimondii 79  
Gorai.007G323800.1 A0A0D2SUI1 PAC:26780352 Gossypium raimondii 84  
Gorai.007G252100.1 A0A0D2TL80 PAC:26785125 Gossypium raimondii 157  
21174 PAC:27391869 Coccomyxa subellipsoidea C-169 400  
Thecc1EG046398t1 PAC:27459551 Theobroma cacao 215  
Migut.D01432.1.p PAC:28927466 Mimulus guttatus 124  
Migut.I00427.1.p PAC:28930121 Mimulus guttatus 70  
Migut.K00751.1.p PAC:28937147 Mimulus guttatus 96  
Cagra.5120s0021.1.p PAC:28904246 Capsella grandiflora 395  
Glyma.05G092000.1.p K7KP66 PAC:30525254 Glycine max 366  
Glyma.01G058600.1.p I1J601 PAC:30544688 Glycine max 116  
Brara.K00789.1.p PAC:30623358 Brassica rapa FPsc 383  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8329437
            2509716