Protein Domain : IPR016174

Type:  Domain Name:  Di-haem cytochrome, transmembrane
Description:  This entry represents a haem-binding domain with a 4-helical bundle structure that is found in transmembrane di-haem cytochromes. The domain contains four transmembrane helices in an up-and-down bundle, and binds two haem groups in between the helices; three of the four haem-binding residues is conserved between family members. Proteins containing this domain include:N-terminal domain of mitochondrial cytochrome b subunit, in which the domain contains an extra transmembrane linker helix that is absent in plant and cyanobacteria subunits [].Cytochrome b6 subunit of the cytochrome b6f complex, which provides the electronic connection between the photosystems I and II reaction centres of oxygenic photosynthesis, and generates a transmembrane electrochemical proton gradient for adenosine triphosphate synthesis [].Cytochrome gamma subunit of formate dehydrogenase-N (Fdn-N), which acts as a major component of Escherichia colinitrate respiration [].Please note, this entry also identifies a number of proteins that are cleaved into two chains - a truncated non-functional cytochrome oxidase 1 and an intron-encoded endonuclease. Short Name:  Di-haem_cyt_TM

2 Child Features

DB identifier Type Name
IPR005797 Domain Cytochrome b/b6, N-terminal
IPR011577 Domain Cytochrome b561, bacterial/Ni-hydrogenase

0 Contains

2 Cross Referencess

Identifier
PF00033
SSF81342

1 Found In

DB identifier Type Name
IPR006471 Family Formate dehydrogenase, gamma subunit

2 GO Annotations

GO Term Gene Name
GO:0022904 IPR016174
GO:0016020 IPR016174

2 Ontology Annotations

GO Term Gene Name
GO:0022904 IPR016174
GO:0016020 IPR016174

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
137714 D8TE99 PAC:15422124 Selaginella moellendorffii 275  
139134 PAC:15423451 Selaginella moellendorffii 326  
evm.model.supercontig_102.24 PAC:16404842 Carica papaya 262  
30078.m002277 B9S0G0 PAC:16817388 Ricinus communis 263  
28213.m000043 B9TAU9 PAC:16800347 Ricinus communis 180  
Cucsa.124720.1 A0A0A0KIF5 PAC:16961759 Cucumis sativus 255  
Cucsa.180050.1 PAC:16967277 Cucumis sativus 142  
orange1.1g036745m A0A067FBK0 PAC:18095085 Citrus sinensis 151  
ATCG00720.1 P56773 PAC:19638013 Arabidopsis thaliana 215  
ATMG00590.1 P93314 PAC:19643686 Arabidopsis thaliana 313  
ATMG00220.1 PAC:19643621 Arabidopsis thaliana 393  
AT2G36885.2 F4IP26 PAC:19642374 Arabidopsis thaliana 255  
AT2G36885.1 Q8S8F1 PAC:19642373 Arabidopsis thaliana 256  
AT2G07727.1 PAC:19641704 Arabidopsis thaliana 393  
AT2G07718.1 P93314 PAC:19641150 Arabidopsis thaliana 313  
Thhalv10017130m V4M7M4 PAC:20180808 Eutrema salsugineum 255  
Thhalv10001270m V4L773 PAC:20208999 Eutrema salsugineum 393  
Ciclev10003393m V4SDP7 PAC:20789214 Citrus clementina 128  
Lus10026542 PAC:23164294 Linum usitatissimum 269  
Lus10013829 PAC:23159456 Linum usitatissimum 274  
Potri.009G005000.1 B9HQP6 PAC:26986100 Populus trichocarpa 62  
Potri.001G188100.1 A0A2K2C006 PAC:27042130 Populus trichocarpa 109  
Potri.004G058600.1 B9H2G9 PAC:26990213 Populus trichocarpa 76  
Potri.011G113500.1 PAC:27001757 Populus trichocarpa 185  
Potri.011G074700.1 A0A2K1YGX7 PAC:27002538 Populus trichocarpa 214  
Potri.013G137300.1 PAC:26996029 Populus trichocarpa 214  
Potri.013G136700.1 A0A2K1Y5I7 PAC:26995976 Populus trichocarpa 143  
Gorai.001G132300.1 A0A0D2PQS9 PAC:26823530 Gossypium raimondii 102  
Gorai.001G162000.1 A0A0D2PSA8 PAC:26819541 Gossypium raimondii 392  
Gorai.002G246500.1 A0A0D2QIE5 PAC:26794453 Gossypium raimondii 261  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            14526088
            11884747
            16024040