Protein Domain : IPR016453

Type:  Family Name:  Coatomer beta' subunit (COPB2)
Description:  Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This group represents the coatomer beta' subunit. Short Name:  COPB2

0 Child Features

5 Contains

DB identifier Type Name
IPR015943 Domain WD40/YVTN repeat-like-containing domain
IPR001680 Repeat WD40 repeat
IPR017986 Domain WD40-repeat-containing domain
IPR020472 Repeat G-protein beta WD-40 repeat
IPR006692 Domain Coatomer, WD associated region

1 Cross References

Identifier
PIRSF005567

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
77968 D8QUM2 PAC:15422428 Selaginella moellendorffii 816  
Lus10011467 PAC:23182650 Linum usitatissimum 939  
Potri.003G056300.3 A0A2K2B220 PAC:26997914 Populus trichocarpa 863  
Potri.003G056300.2 PAC:26997913 Populus trichocarpa 903  
Gorai.009G132800.7 A0A0D2TPJ2 PAC:26768272 Gossypium raimondii 868  
37656 I0YR24 PAC:27388069 Coccomyxa subellipsoidea C-169 886  
Thecc1EG028674t9 A0A061GBE5 PAC:27440704 Theobroma cacao 864  
Thecc1EG028674t5 A0A061GI27 PAC:27440703 Theobroma cacao 868  
Spipo8G0008800 PAC:31511571 Spirodela polyrhiza 906  
GSMUA_Achr6P05400_001 PAC:32318716 Musa acuminata 998  
Brdisv1Mur11042548m.p PAC:35358539 Brachypodium distachyon Mur1 737  
Brdisv1Mur11042549m.p PAC:35358540 Brachypodium distachyon Mur1 734  
AL1G60610.t1 PAC:35931764 Arabidopsis lyrata 874  
DCAR_007555 PAC:36065466 Daucus carota 917  
AUR62016439-RA PAC:36290204 Chenopodium quinoa 899  
AUR62011624-RA PAC:36308345 Chenopodium quinoa 918  
Phvul.005G172000.1.p V7C063 PAC:37153272 Phaseolus vulgaris 912  
Phvul.010G151200.1.p V7ASX4 PAC:37142874 Phaseolus vulgaris 909  
Zm00008a018563_P01 PAC:37195112 Zea mays PH207 873  
Zm00008a021714_P01 PAC:37209802 Zea mays PH207 881  
Potri.001G179200.6.p U5GW52 PAC:37280095 Populus trichocarpa 916  
Potri.001G179200.4.p A0A2K2BZJ4 PAC:37280099 Populus trichocarpa 912  
Potri.001G179200.3.p A0A2K2BZJ5 PAC:37280098 Populus trichocarpa 912  
Potri.001G179200.2.p U5GW52 PAC:37280097 Populus trichocarpa 916  
Potri.001G179200.8.p U5GW52 PAC:37280096 Populus trichocarpa 916  
Potri.003G056300.3.p A0A2K2B220 PAC:37236297 Populus trichocarpa 863  
Potri.003G056300.7.p A0A3N7EPI6 PAC:37236296 Populus trichocarpa 907  
Potri.003G056300.4.p A0A2K2B219 PAC:37236298 Populus trichocarpa 833  
Potri.003G056300.8.p A0A3N7EPI6 PAC:37236294 Populus trichocarpa 907  
Potri.003G056300.5.p A0A2K2B222 PAC:37236293 Populus trichocarpa 911  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            14690497
            15261670
            17041781
            11208122