Protein Domain : IPR016685

Type:  Family Name:  RNA-induced silencing complex, nuclease component Tudor-SN
Description:  This entry represents the Tudor staphylococcal nuclease (Tudor-SN) subunit of the RNA-induced silencing complex (RISC) [, ]. RISC is central to the mechanism of RNA interference (RNAi), which is triggered by the presence of dsRNA, resulting in silencing of the cognate gene. In RNAi, dsRNA is processed by RNase III ribonucleases (from Dicer family) to yield small interfering RNAs (siRNAs), which are unwound and incorporated into the RISC ribonucleoprotein complex that ultimately targets the cognate mRNA. Various components of the RISC have been identified that are highly conserved between species. In Drosophila melanogaster(Fruit fly) these subunits include the proteins Argonaute2, VIG, FXR and Tudor-SN. Tudor-SN binds to hyper-edited double-stranded RNA and promotes its cleavage. Short Name:  Silence_cplx_Nase-comp_TudorSN

0 Child Features

2 Contains

DB identifier Type Name
IPR016071 Domain Staphylococcal nuclease (SNase-like), OB-fold
IPR002999 Domain Tudor domain

1 Cross References

Identifier
PIRSF017179

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0031047 IPR016685
GO:0016442 IPR016685

2 Ontology Annotations

GO Term Gene Name
GO:0031047 IPR016685
GO:0016442 IPR016685

0 Parent Features

708 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
165776 D8QXD4 PAC:15415853 Selaginella moellendorffii 947  
evm.model.supercontig_13.196 PAC:16407709 Carica papaya 992  
30147.m014382 B9RA39 PAC:16820393 Ricinus communis 988  
Cucsa.156850.14 PAC:16964897 Cucumis sativus 820  
Cucsa.156850.9 A0A0A0LRJ8 PAC:16964905 Cucumis sativus 988  
Cucsa.156850.1 A0A0A0LRJ8 PAC:16964892 Cucumis sativus 988  
Cucsa.156850.7 A0A0A0LRJ8 PAC:16964903 Cucumis sativus 988  
orange1.1g001725m A0A067F379 PAC:18119182 Citrus sinensis 1020  
orange1.1g002271m A0A067ER55 PAC:18119185 Citrus sinensis 944  
orange1.1g001723m A0A067F379 PAC:18119183 Citrus sinensis 1020  
orange1.1g002576m A0A067EUU6 PAC:18119187 Citrus sinensis 906  
orange1.1g003181m A0A067F2F5 PAC:18119190 Citrus sinensis 841  
orange1.1g003943m A0A067EUV1 PAC:18119192 Citrus sinensis 784  
orange1.1g001739m A0A067EUU1 PAC:18119184 Citrus sinensis 1019  
orange1.1g002945m A0A067F385 PAC:18119188 Citrus sinensis 863  
orange1.1g002274m A0A067ER55 PAC:18119186 Citrus sinensis 944  
orange1.1g003128m A0A067ERB8 PAC:18119189 Citrus sinensis 845  
orange1.1g003834m A0A067ER60 PAC:18119191 Citrus sinensis 792  
AT5G07350.1 Q8VZG7 PAC:19672682 Arabidopsis thaliana 991  
AT5G07350.2 Q8VZG7 PAC:19672681 Arabidopsis thaliana 1007  
AT5G61780.1 Q9FLT0 PAC:19671847 Arabidopsis thaliana 985  
Thhalv10012565m V4LE39 PAC:20204604 Eutrema salsugineum 990  
Thhalv10003668m V4K1H1 PAC:20198935 Eutrema salsugineum 805  
Thhalv10003594m V4KKM6 PAC:20198934 Eutrema salsugineum 983  
Ciclev10030676m V4TKD6 PAC:20803400 Citrus clementina 881  
Ciclev10030606m V4VCZ9 PAC:20803397 Citrus clementina 1020  
Ciclev10030640m V4TAH1 PAC:20803398 Citrus clementina 957  
Ciclev10030643m V4TF87 PAC:20803399 Citrus clementina 944  
Lus10032520 PAC:23146309 Linum usitatissimum 988  
Lus10043020 PAC:23168185 Linum usitatissimum 1032  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            15895094
            17715366