Protein Domain : IPR001298

Type:  Repeat Name:  Filamin/ABP280 repeat
Description:  The many different actin cross-linking proteins share a common architecture, consisting of a globular actin-binding domain and an extended rod. Whereas their actin-binding domains consist of two calponin homology domains (see ), their rods fall into three families.The rod domain of the family including the Dictyostelium discoideum(Slime mould) gelation factor (ABP120) and human filamin (ABP280) is constructed from tandem repeats of a 100-residue motif that is glycine and proline rich []. The gelation factor's rod contains 6 copies of the repeat, whereas filamin has a rod constructed from 24 repeats. The resolution of the 3D structure of rod repeats from the gelation factor has shown that they consist of a beta-sandwich, formed by two beta-sheets arranged in an immunoglobulin-like fold [, ]. Because conserved residues that form the core of the repeats are preserved in filamin, the repeat structure should be common to the members of the gelation factor/filamin family.The head to tail homodimerisation is crucial to the function of the ABP120 and ABP280 proteins. This interaction involves a small portion at the distal end of the rod domains. For the gelation factor it has been shown that the carboxy-terminal repeat 6 dimerises through a double edge-to-edge extension of the beta-sheet and that repeat 5 contributes to dimerisation to some extent [, , ]. Short Name:  Filamin/ABP280_rpt

0 Child Features

0 Contains

1 Cross References

Identifier
SM00557

2 Found Ins

DB identifier Type Name
IPR014756 Domain Immunoglobulin E-set
IPR013783 Domain Immunoglobulin-like fold

1 GO Annotation

GO Term Gene Name
GO:0005515 IPR001298

1 Ontology Annotations

GO Term Gene Name
GO:0005515 IPR001298

0 Parent Features

332 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
416480 D8RZE9 PAC:15423216 Selaginella moellendorffii 1365  
407438 D8R5L7 PAC:15418976 Selaginella moellendorffii 1810  
evm.model.supercontig_83.41 PAC:16427180 Carica papaya 181  
AT5G49150.1 F4K4R6 PAC:19669214 Arabidopsis thaliana 914  
Thhalv10005444m V4KQV6 PAC:20198910 Eutrema salsugineum 971  
Gorai.005G061500.1 A0A0D2PNF4 PAC:26804405 Gossypium raimondii 1048  
18773 I0YPD7 PAC:27393975 Coccomyxa subellipsoidea C-169 700  
152475 PAC:27347221 Micromonas pusilla CCMP1545 684  
56093 C1MP01 PAC:27347387 Micromonas pusilla CCMP1545 4726  
104912 C1FFW4 PAC:27403265 Micromonas sp RCC299 4434  
104083 C1EH03 PAC:27403659 Micromonas sp RCC299 4155  
59686 C1E9C8 PAC:27402121 Micromonas sp RCC299 4732  
Migut.G00133.1.p PAC:28942696 Mimulus guttatus 1018  
Cagra.3134s0011.1.p PAC:28916300 Capsella grandiflora 972  
Brara.B03474.1.p A0A398AG54 PAC:30609687 Brassica rapa FPsc 1063  
Bostr.15774s0043.1.p PAC:30666075 Boechera stricta 1036  
Traes_5AL_677B189DF.1 PAC:31910552 Triticum aestivum 854  
Traes_5AL_677B189DF.2 PAC:31910553 Triticum aestivum 832  
Traes_5AL_677B189DF.3 PAC:31910554 Triticum aestivum 766  
Traes_5BL_990E3FD07.2 PAC:31870404 Triticum aestivum 900  
Traes_5BL_990E3FD07.1 PAC:31870403 Triticum aestivum 1118  
Traes_5DL_BC24DCBD1.1 PAC:32010772 Triticum aestivum 1120  
Eucgr.L00037.1.p A0A058ZXH0 PAC:32047321 Eucalyptus grandis 733  
Manes.04G046500.1.p A0A251L0W3 PAC:32327900 Manihot esculenta 441  
Manes.04G046500.2.p A0A251L0W3 PAC:32327901 Manihot esculenta 441  
Pahal.B02870.1 A0A2S3GZW7 PAC:32491805 Panicum hallii 1103  
Kalax.0242s0012.1.p PAC:32588178 Kalanchoe laxiflora 1162  
Kalax.0353s0025.1.p PAC:32597184 Kalanchoe laxiflora 1155  
Mapoly0070s0033.1.p A0A2R6WNY8 PAC:33007621 Marchantia polymorpha 4417  
Brdisv1pangenome1005989m.p PAC:33658034 Brachypodium distachyon Pangenome 927  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9164464
            9417983
            10467095
            2668299