Gene : Thhalv10024301m.g E. salsugineum v1.0

Defline:  (1 of 3) PTHR24093:SF262 - CALCIUM-TRANSPORTING ATPASE 2, PLASMA MEMBRANE-TYPE-RELATED Genomic Order:  237
Name:  ? Thhalv10024301m.g Secondary Identifier:  ? PAC:20195886

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10024301m.g 0.5kb upstream 0.5kb upstream 4755 true scaffold_1: 954388-959142 Eutrema salsugineum
Thhalv10024301m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 954388-954887 Eutrema salsugineum
Thhalv10024301m.g 0.5kb downstream 0.5kb downstream 4755 true scaffold_1: 954888-959642 Eutrema salsugineum
Thhalv10024301m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 959143-959642 Eutrema salsugineum
Thhalv10024301m.g 1.0kb upstream 1.0kb upstream 5255 true scaffold_1: 953888-959142 Eutrema salsugineum
Thhalv10024301m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 953888-954887 Eutrema salsugineum
Thhalv10024301m.g 1.0kb downstream 1.0kb downstream 5255 true scaffold_1: 954888-960142 Eutrema salsugineum
Thhalv10024301m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 959143-960142 Eutrema salsugineum
Thhalv10024301m.g 2.0kb upstream 2.0kb upstream 6255 true scaffold_1: 952888-959142 Eutrema salsugineum
Thhalv10024301m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 952888-954887 Eutrema salsugineum
Thhalv10024301m.g 2.0kb downstream 2.0kb downstream 6255 true scaffold_1: 954888-961142 Eutrema salsugineum
Thhalv10024301m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 959143-961142 Eutrema salsugineum
Thhalv10024301m.g 5.0kb upstream 5.0kb upstream 9255 true scaffold_1: 949888-959142 Eutrema salsugineum
Thhalv10024301m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 949888-954887 Eutrema salsugineum
Thhalv10024301m.g 5.0kb downstream 5.0kb downstream 9255 true scaffold_1: 954888-964142 Eutrema salsugineum
Thhalv10024301m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 959143-964142 Eutrema salsugineum
Thhalv10024301m.g 10.0kb upstream 10.0kb upstream 14255 true scaffold_1: 944888-959142 Eutrema salsugineum
Thhalv10024301m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 944888-954887 Eutrema salsugineum
Thhalv10024301m.g 10.0kb downstream 10.0kb downstream 14255 true scaffold_1: 954888-969142 Eutrema salsugineum
Thhalv10024301m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 959143-969142 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376830 5261 Brassicaceae View MSA
123839604 5264 Brassicales-Malvales View MSA
124343745 5266 SBM View MSA
124238612 5268 Malvidae View MSA
124067452 5270 Rosid View MSA
123746765 5271 Pentapetalae View MSA
122788343 5272 Eudicot View MSA
122047165 5273 Angiosperm View MSA
121349207 5274 Embryophyte View MSA
123428805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain