Gene : Thhalv10024609m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR22594:SF5 - ASPARTATE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  626
Name:  ? Thhalv10024609m.g Secondary Identifier:  ? PAC:20193497
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum TRNA-CHARGING-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10024609m.g 0.5kb upstream 0.5kb upstream 4659 true scaffold_1: 2657423-2662081 Eutrema salsugineum
Thhalv10024609m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2657423-2657922 Eutrema salsugineum
Thhalv10024609m.g 0.5kb downstream 0.5kb downstream 4659 true scaffold_1: 2657923-2662581 Eutrema salsugineum
Thhalv10024609m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2662082-2662581 Eutrema salsugineum
Thhalv10024609m.g 1.0kb upstream 1.0kb upstream 5159 true scaffold_1: 2656923-2662081 Eutrema salsugineum
Thhalv10024609m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2656923-2657922 Eutrema salsugineum
Thhalv10024609m.g 1.0kb downstream 1.0kb downstream 5159 true scaffold_1: 2657923-2663081 Eutrema salsugineum
Thhalv10024609m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2662082-2663081 Eutrema salsugineum
Thhalv10024609m.g 2.0kb upstream 2.0kb upstream 6159 true scaffold_1: 2655923-2662081 Eutrema salsugineum
Thhalv10024609m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2655923-2657922 Eutrema salsugineum
Thhalv10024609m.g 2.0kb downstream 2.0kb downstream 6159 true scaffold_1: 2657923-2664081 Eutrema salsugineum
Thhalv10024609m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2662082-2664081 Eutrema salsugineum
Thhalv10024609m.g 5.0kb upstream 5.0kb upstream 9159 true scaffold_1: 2652923-2662081 Eutrema salsugineum
Thhalv10024609m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2652923-2657922 Eutrema salsugineum
Thhalv10024609m.g 5.0kb downstream 5.0kb downstream 9159 true scaffold_1: 2657923-2667081 Eutrema salsugineum
Thhalv10024609m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2662082-2667081 Eutrema salsugineum
Thhalv10024609m.g 10.0kb upstream 10.0kb upstream 14159 true scaffold_1: 2647923-2662081 Eutrema salsugineum
Thhalv10024609m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2647923-2657922 Eutrema salsugineum
Thhalv10024609m.g 10.0kb downstream 10.0kb downstream 14159 true scaffold_1: 2657923-2672081 Eutrema salsugineum
Thhalv10024609m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2662082-2672081 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368024 5261 Brassicaceae View MSA
123833366 5264 Brassicales-Malvales View MSA
124350265 5266 SBM View MSA
124243191 5268 Malvidae View MSA
124067030 5270 Rosid View MSA
123742204 5271 Pentapetalae View MSA
122792299 5272 Eudicot View MSA
122041718 5273 Angiosperm View MSA
121346039 5274 Embryophyte View MSA
123424871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain