Gene : Thhalv10025272m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR23023:SF83 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA5-RELATED Genomic Order:  1141
Name:  ? Thhalv10025272m.g Secondary Identifier:  ? PAC:20194948
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWYDQC-4 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10025272m.g 0.5kb upstream 0.5kb upstream 2178 true scaffold_1: 4867298-4869475 Eutrema salsugineum
Thhalv10025272m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4868976-4869475 Eutrema salsugineum
Thhalv10025272m.g 0.5kb downstream 0.5kb downstream 2178 true scaffold_1: 4866798-4868975 Eutrema salsugineum
Thhalv10025272m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4866798-4867297 Eutrema salsugineum
Thhalv10025272m.g 1.0kb upstream 1.0kb upstream 2678 true scaffold_1: 4867298-4869975 Eutrema salsugineum
Thhalv10025272m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4868976-4869975 Eutrema salsugineum
Thhalv10025272m.g 1.0kb downstream 1.0kb downstream 2678 true scaffold_1: 4866298-4868975 Eutrema salsugineum
Thhalv10025272m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4866298-4867297 Eutrema salsugineum
Thhalv10025272m.g 2.0kb upstream 2.0kb upstream 3678 true scaffold_1: 4867298-4870975 Eutrema salsugineum
Thhalv10025272m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4868976-4870975 Eutrema salsugineum
Thhalv10025272m.g 2.0kb downstream 2.0kb downstream 3678 true scaffold_1: 4865298-4868975 Eutrema salsugineum
Thhalv10025272m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4865298-4867297 Eutrema salsugineum
Thhalv10025272m.g 5.0kb upstream 5.0kb upstream 6678 true scaffold_1: 4867298-4873975 Eutrema salsugineum
Thhalv10025272m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4868976-4873975 Eutrema salsugineum
Thhalv10025272m.g 5.0kb downstream 5.0kb downstream 6678 true scaffold_1: 4862298-4868975 Eutrema salsugineum
Thhalv10025272m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4862298-4867297 Eutrema salsugineum
Thhalv10025272m.g 10.0kb upstream 10.0kb upstream 11678 true scaffold_1: 4867298-4878975 Eutrema salsugineum
Thhalv10025272m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4868976-4878975 Eutrema salsugineum
Thhalv10025272m.g 10.0kb downstream 10.0kb downstream 11678 true scaffold_1: 4857298-4868975 Eutrema salsugineum
Thhalv10025272m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4857298-4867297 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363996 5261 Brassicaceae View MSA
123831660 5264 Brassicales-Malvales View MSA
124346483 5266 SBM View MSA
124244542 5268 Malvidae View MSA
124062448 5270 Rosid View MSA
123751619 5271 Pentapetalae View MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain