Gene : Thhalv10025481m.g E. salsugineum v1.0
Defline:  (1 of 8) 2.5.1.1//2.5.1.10//2.5.1.29 - Dimethylallyltranstransferase / Prenyltransferase // (2E,6E)-farnesyl diphosphate synthase / Geranyltranstransferase // Geranylgeranyl diphosphate synthase / Geranylgeranyl-PP synthetase Genomic Order:  322
Name:  ? Thhalv10025481m.g Secondary Identifier:  ? PAC:20192887
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5120 Eutrema salsugineum pathologic  
Esalsugineum PWY-5122 Eutrema salsugineum pathologic  
Esalsugineum PWY-5123 Eutrema salsugineum pathologic  
Esalsugineum PWY-5910 Eutrema salsugineum pathologic  
Esalsugineum PWY-7709 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10025481m.g 0.5kb upstream 0.5kb upstream 1998 true scaffold_1: 1369281-1371278 Eutrema salsugineum
Thhalv10025481m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1370779-1371278 Eutrema salsugineum
Thhalv10025481m.g 0.5kb downstream 0.5kb downstream 1998 true scaffold_1: 1368781-1370778 Eutrema salsugineum
Thhalv10025481m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1368781-1369280 Eutrema salsugineum
Thhalv10025481m.g 1.0kb upstream 1.0kb upstream 2498 true scaffold_1: 1369281-1371778 Eutrema salsugineum
Thhalv10025481m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1370779-1371778 Eutrema salsugineum
Thhalv10025481m.g 1.0kb downstream 1.0kb downstream 2498 true scaffold_1: 1368281-1370778 Eutrema salsugineum
Thhalv10025481m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1368281-1369280 Eutrema salsugineum
Thhalv10025481m.g 2.0kb upstream 2.0kb upstream 3498 true scaffold_1: 1369281-1372778 Eutrema salsugineum
Thhalv10025481m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1370779-1372778 Eutrema salsugineum
Thhalv10025481m.g 2.0kb downstream 2.0kb downstream 3498 true scaffold_1: 1367281-1370778 Eutrema salsugineum
Thhalv10025481m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1367281-1369280 Eutrema salsugineum
Thhalv10025481m.g 5.0kb upstream 5.0kb upstream 6498 true scaffold_1: 1369281-1375778 Eutrema salsugineum
Thhalv10025481m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1370779-1375778 Eutrema salsugineum
Thhalv10025481m.g 5.0kb downstream 5.0kb downstream 6498 true scaffold_1: 1364281-1370778 Eutrema salsugineum
Thhalv10025481m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1364281-1369280 Eutrema salsugineum
Thhalv10025481m.g 10.0kb upstream 10.0kb upstream 11498 true scaffold_1: 1369281-1380778 Eutrema salsugineum
Thhalv10025481m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1370779-1380778 Eutrema salsugineum
Thhalv10025481m.g 10.0kb downstream 10.0kb downstream 11498 true scaffold_1: 1359281-1370778 Eutrema salsugineum
Thhalv10025481m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1359281-1369280 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367491 5261 Brassicaceae View MSA
123840424 5264 Brassicales-Malvales View MSA
124338716 5266 SBM View MSA
124237101 5268 Malvidae View MSA
124062615 5270 Rosid View MSA
123750127 5271 Pentapetalae View MSA
122794006 5272 Eudicot View MSA
122045672 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain