Gene : Thhalv10025955m.g E. salsugineum v1.0
Defline:  (1 of 3) PF03446//PF14833 - NAD binding domain of 6-phosphogluconate dehydrogenase (NAD_binding_2) // NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase (NAD_binding_11) Genomic Order:  1951
Name:  ? Thhalv10025955m.g Secondary Identifier:  ? PAC:20193700
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum VALDEG-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10025955m.g 0.5kb upstream 0.5kb upstream 2716 true scaffold_1: 8288871-8291586 Eutrema salsugineum
Thhalv10025955m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8288871-8289370 Eutrema salsugineum
Thhalv10025955m.g 0.5kb downstream 0.5kb downstream 2716 true scaffold_1: 8289371-8292086 Eutrema salsugineum
Thhalv10025955m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8291587-8292086 Eutrema salsugineum
Thhalv10025955m.g 1.0kb upstream 1.0kb upstream 3216 true scaffold_1: 8288371-8291586 Eutrema salsugineum
Thhalv10025955m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8288371-8289370 Eutrema salsugineum
Thhalv10025955m.g 1.0kb downstream 1.0kb downstream 3216 true scaffold_1: 8289371-8292586 Eutrema salsugineum
Thhalv10025955m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8291587-8292586 Eutrema salsugineum
Thhalv10025955m.g 2.0kb upstream 2.0kb upstream 4216 true scaffold_1: 8287371-8291586 Eutrema salsugineum
Thhalv10025955m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8287371-8289370 Eutrema salsugineum
Thhalv10025955m.g 2.0kb downstream 2.0kb downstream 4216 true scaffold_1: 8289371-8293586 Eutrema salsugineum
Thhalv10025955m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8291587-8293586 Eutrema salsugineum
Thhalv10025955m.g 5.0kb upstream 5.0kb upstream 7216 true scaffold_1: 8284371-8291586 Eutrema salsugineum
Thhalv10025955m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8284371-8289370 Eutrema salsugineum
Thhalv10025955m.g 5.0kb downstream 5.0kb downstream 7216 true scaffold_1: 8289371-8296586 Eutrema salsugineum
Thhalv10025955m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8291587-8296586 Eutrema salsugineum
Thhalv10025955m.g 10.0kb upstream 10.0kb upstream 12216 true scaffold_1: 8279371-8291586 Eutrema salsugineum
Thhalv10025955m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8279371-8289370 Eutrema salsugineum
Thhalv10025955m.g 10.0kb downstream 10.0kb downstream 12216 true scaffold_1: 8289371-8301586 Eutrema salsugineum
Thhalv10025955m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8291587-8301586 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377505 5261 Brassicaceae View MSA
123831545 5264 Brassicales-Malvales View MSA
124341286 5266 SBM View MSA
124237017 5268 Malvidae View MSA
124062564 5270 Rosid View MSA
123738883 5271 Pentapetalae View MSA
122787575 5272 Eudicot View MSA
122045971 5273 Angiosperm View MSA
121347535 5274 Embryophyte View MSA
123424560 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain