Gene : Thhalv10016505m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11586:SF1 - NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN Genomic Order:  1446
Name:  ? Thhalv10016505m.g Secondary Identifier:  ? PAC:20181283
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum TRNA-CHARGING-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10016505m.g 0.5kb upstream 0.5kb upstream 4236 true scaffold_10: 10892527-10896762 Eutrema salsugineum
Thhalv10016505m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 10892527-10893026 Eutrema salsugineum
Thhalv10016505m.g 0.5kb downstream 0.5kb downstream 4236 true scaffold_10: 10893027-10897262 Eutrema salsugineum
Thhalv10016505m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 10896763-10897262 Eutrema salsugineum
Thhalv10016505m.g 1.0kb upstream 1.0kb upstream 4736 true scaffold_10: 10892027-10896762 Eutrema salsugineum
Thhalv10016505m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 10892027-10893026 Eutrema salsugineum
Thhalv10016505m.g 1.0kb downstream 1.0kb downstream 4736 true scaffold_10: 10893027-10897762 Eutrema salsugineum
Thhalv10016505m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 10896763-10897762 Eutrema salsugineum
Thhalv10016505m.g 2.0kb upstream 2.0kb upstream 5736 true scaffold_10: 10891027-10896762 Eutrema salsugineum
Thhalv10016505m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 10891027-10893026 Eutrema salsugineum
Thhalv10016505m.g 2.0kb downstream 2.0kb downstream 5736 true scaffold_10: 10893027-10898762 Eutrema salsugineum
Thhalv10016505m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 10896763-10898762 Eutrema salsugineum
Thhalv10016505m.g 5.0kb upstream 5.0kb upstream 8736 true scaffold_10: 10888027-10896762 Eutrema salsugineum
Thhalv10016505m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 10888027-10893026 Eutrema salsugineum
Thhalv10016505m.g 5.0kb downstream 5.0kb downstream 8736 true scaffold_10: 10893027-10901762 Eutrema salsugineum
Thhalv10016505m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 10896763-10901762 Eutrema salsugineum
Thhalv10016505m.g 10.0kb upstream 10.0kb upstream 13736 true scaffold_10: 10883027-10896762 Eutrema salsugineum
Thhalv10016505m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 10883027-10893026 Eutrema salsugineum
Thhalv10016505m.g 10.0kb downstream 10.0kb downstream 13736 true scaffold_10: 10893027-10906762 Eutrema salsugineum
Thhalv10016505m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 10896763-10906762 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122356861 5261 Brassicaceae Singleton cluster - no MSA
123838875 5264 Brassicales-Malvales View MSA
124339566 5266 SBM View MSA
124237749 5268 Malvidae View MSA
124063262 5270 Rosid View MSA
123740350 5271 Pentapetalae View MSA
122787501 5272 Eudicot View MSA
122043552 5273 Angiosperm View MSA
121350669 5274 Embryophyte View MSA
123427531 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain