Gene : Thhalv10016598m.g E. salsugineum v1.0

Defline:  (1 of 1) 2.5.1.75//2.5.1.8 - tRNA dimethylallyltransferase / tRNA prenyltransferase Genomic Order:  59
Name:  ? Thhalv10016598m.g Secondary Identifier:  ? PAC:20180591

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-2781 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10016598m.g 0.5kb upstream 0.5kb upstream 3343 true scaffold_10: 2759175-2762517 Eutrema salsugineum
Thhalv10016598m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 2759175-2759674 Eutrema salsugineum
Thhalv10016598m.g 0.5kb downstream 0.5kb downstream 3343 true scaffold_10: 2759675-2763017 Eutrema salsugineum
Thhalv10016598m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 2762518-2763017 Eutrema salsugineum
Thhalv10016598m.g 1.0kb upstream 1.0kb upstream 3843 true scaffold_10: 2758675-2762517 Eutrema salsugineum
Thhalv10016598m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 2758675-2759674 Eutrema salsugineum
Thhalv10016598m.g 1.0kb downstream 1.0kb downstream 3843 true scaffold_10: 2759675-2763517 Eutrema salsugineum
Thhalv10016598m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 2762518-2763517 Eutrema salsugineum
Thhalv10016598m.g 2.0kb upstream 2.0kb upstream 4843 true scaffold_10: 2757675-2762517 Eutrema salsugineum
Thhalv10016598m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 2757675-2759674 Eutrema salsugineum
Thhalv10016598m.g 2.0kb downstream 2.0kb downstream 4843 true scaffold_10: 2759675-2764517 Eutrema salsugineum
Thhalv10016598m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 2762518-2764517 Eutrema salsugineum
Thhalv10016598m.g 5.0kb upstream 5.0kb upstream 7843 true scaffold_10: 2754675-2762517 Eutrema salsugineum
Thhalv10016598m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 2754675-2759674 Eutrema salsugineum
Thhalv10016598m.g 5.0kb downstream 5.0kb downstream 7843 true scaffold_10: 2759675-2767517 Eutrema salsugineum
Thhalv10016598m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 2762518-2767517 Eutrema salsugineum
Thhalv10016598m.g 10.0kb upstream 10.0kb upstream 12843 true scaffold_10: 2749675-2762517 Eutrema salsugineum
Thhalv10016598m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 2749675-2759674 Eutrema salsugineum
Thhalv10016598m.g 10.0kb downstream 10.0kb downstream 12843 true scaffold_10: 2759675-2772517 Eutrema salsugineum
Thhalv10016598m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 2762518-2772517 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368424 5261 Brassicaceae View MSA
123829881 5264 Brassicales-Malvales View MSA
124341186 5266 SBM View MSA
124237020 5268 Malvidae View MSA
124061128 5270 Rosid View MSA
123740850 5271 Pentapetalae View MSA
122786758 5272 Eudicot View MSA
122043118 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain