Gene : Thhalv10016643m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR12428:SF19 - INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC Genomic Order:  178
Name:  ? Thhalv10016643m.g Secondary Identifier:  ? PAC:20181189
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PHOTOALL-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-101 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10016643m.g 0.5kb upstream 0.5kb upstream 3402 true scaffold_10: 4216902-4220303 Eutrema salsugineum
Thhalv10016643m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 4219804-4220303 Eutrema salsugineum
Thhalv10016643m.g 0.5kb downstream 0.5kb downstream 3402 true scaffold_10: 4216402-4219803 Eutrema salsugineum
Thhalv10016643m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 4216402-4216901 Eutrema salsugineum
Thhalv10016643m.g 1.0kb upstream 1.0kb upstream 3902 true scaffold_10: 4216902-4220803 Eutrema salsugineum
Thhalv10016643m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 4219804-4220803 Eutrema salsugineum
Thhalv10016643m.g 1.0kb downstream 1.0kb downstream 3902 true scaffold_10: 4215902-4219803 Eutrema salsugineum
Thhalv10016643m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 4215902-4216901 Eutrema salsugineum
Thhalv10016643m.g 2.0kb upstream 2.0kb upstream 4902 true scaffold_10: 4216902-4221803 Eutrema salsugineum
Thhalv10016643m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 4219804-4221803 Eutrema salsugineum
Thhalv10016643m.g 2.0kb downstream 2.0kb downstream 4902 true scaffold_10: 4214902-4219803 Eutrema salsugineum
Thhalv10016643m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 4214902-4216901 Eutrema salsugineum
Thhalv10016643m.g 5.0kb upstream 5.0kb upstream 7902 true scaffold_10: 4216902-4224803 Eutrema salsugineum
Thhalv10016643m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 4219804-4224803 Eutrema salsugineum
Thhalv10016643m.g 5.0kb downstream 5.0kb downstream 7902 true scaffold_10: 4211902-4219803 Eutrema salsugineum
Thhalv10016643m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 4211902-4216901 Eutrema salsugineum
Thhalv10016643m.g 10.0kb upstream 10.0kb upstream 12902 true scaffold_10: 4216902-4229803 Eutrema salsugineum
Thhalv10016643m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 4219804-4229803 Eutrema salsugineum
Thhalv10016643m.g 10.0kb downstream 10.0kb downstream 12902 true scaffold_10: 4206902-4219803 Eutrema salsugineum
Thhalv10016643m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 4206902-4216901 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363892 5261 Brassicaceae View MSA
123832520 5264 Brassicales-Malvales View MSA
124346396 5266 SBM View MSA
124243172 5268 Malvidae View MSA
124062830 5270 Rosid View MSA
123743978 5271 Pentapetalae View MSA
122791056 5272 Eudicot View MSA
122045068 5273 Angiosperm View MSA
121347702 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain