Gene : Thhalv10017023m.g E. salsugineum v1.0

Defline:  (1 of 1) KOG0114//KOG0131//KOG0144//KOG4210 - Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Nuclear localization sequence binding protein Genomic Order:  1067
Name:  ? Thhalv10017023m.g Secondary Identifier:  ? PAC:20180086

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10017023m.g 0.5kb upstream 0.5kb upstream 2414 true scaffold_10: 9118388-9120801 Eutrema salsugineum
Thhalv10017023m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 9120302-9120801 Eutrema salsugineum
Thhalv10017023m.g 0.5kb downstream 0.5kb downstream 2414 true scaffold_10: 9117888-9120301 Eutrema salsugineum
Thhalv10017023m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 9117888-9118387 Eutrema salsugineum
Thhalv10017023m.g 1.0kb upstream 1.0kb upstream 2914 true scaffold_10: 9118388-9121301 Eutrema salsugineum
Thhalv10017023m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 9120302-9121301 Eutrema salsugineum
Thhalv10017023m.g 1.0kb downstream 1.0kb downstream 2914 true scaffold_10: 9117388-9120301 Eutrema salsugineum
Thhalv10017023m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 9117388-9118387 Eutrema salsugineum
Thhalv10017023m.g 2.0kb upstream 2.0kb upstream 3914 true scaffold_10: 9118388-9122301 Eutrema salsugineum
Thhalv10017023m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 9120302-9122301 Eutrema salsugineum
Thhalv10017023m.g 2.0kb downstream 2.0kb downstream 3914 true scaffold_10: 9116388-9120301 Eutrema salsugineum
Thhalv10017023m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 9116388-9118387 Eutrema salsugineum
Thhalv10017023m.g 5.0kb upstream 5.0kb upstream 6914 true scaffold_10: 9118388-9125301 Eutrema salsugineum
Thhalv10017023m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 9120302-9125301 Eutrema salsugineum
Thhalv10017023m.g 5.0kb downstream 5.0kb downstream 6914 true scaffold_10: 9113388-9120301 Eutrema salsugineum
Thhalv10017023m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 9113388-9118387 Eutrema salsugineum
Thhalv10017023m.g 10.0kb upstream 10.0kb upstream 11914 true scaffold_10: 9118388-9130301 Eutrema salsugineum
Thhalv10017023m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 9120302-9130301 Eutrema salsugineum
Thhalv10017023m.g 10.0kb downstream 10.0kb downstream 11914 true scaffold_10: 9108388-9120301 Eutrema salsugineum
Thhalv10017023m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 9108388-9118387 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040882 5273 Angiosperm View MSA
122379012 5261 Brassicaceae View MSA
123839588 5264 Brassicales-Malvales View MSA
124338231 5266 SBM View MSA
124238282 5268 Malvidae View MSA
124066117 5270 Rosid View MSA
123752208 5271 Pentapetalae View MSA
122797685 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain