Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 124238282

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  26

26 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30078.t000116 (1 of 3) K11294 - nucleolin (NCL, NSR1) R. communis v0.1 2612   30078: 746713-749324
AT2G37220 (1 of 3) K11294 - nucleolin (NCL, NSR1) A. thaliana TAIR10 1885   Chr2: 15634525-15636409
Thhalv10017023m.g (1 of 1) KOG0114//KOG0131//KOG0144//KOG4210 - Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Nuclear localization sequence binding protein E. salsugineum v1.0 1914   scaffold_10: 9118388-9120301
Ciclev10012331m.g (1 of 24) KOG0131 - Splicing factor 3b, subunit 4 C. clementina v1.0 2398   scaffold_6: 10082734-10085131
Lus10023191.g (1 of 1) KOG0105//KOG0106//KOG0110//KOG0131 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 L. usitatissimum v1.0 1447   scaffold325: 865961-867407
Lus10002222.g (1 of 37) KOG0131 - Splicing factor 3b, subunit 4 L. usitatissimum v1.0 1400   scaffold499: 62332-63731
Lus10026514.g (1 of 37) KOG0131 - Splicing factor 3b, subunit 4 L. usitatissimum v1.0 1409   scaffold617: 192856-194264
Gorai.009G416900 (1 of 9) PF00076//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) G. raimondii v2.1 2838   Chr09: 64539378-64542215
Gorai.006G166300 (1 of 32) KOG0131 - Splicing factor 3b, subunit 4 G. raimondii v2.1 2649   Chr06: 42601213-42603861
Thecc1EG022172 (1 of 3) K11294 - nucleolin (NCL, NSR1) T. cacao v1.1 2945   scaffold_5: 2984190-2987134
Araha.14169s0015 (1 of 25) KOG0131 - Splicing factor 3b, subunit 4 A. halleri v1.1 1648   Scaffold14169: 46158-47805
Cagra.0666s0022 (1 of 25) KOG0131 - Splicing factor 3b, subunit 4 C. grandiflora v1.1 1877   Scaffold666: 84159-86035
Brara.D02261 (1 of 1) KOG0131//KOG0144 - Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) B. rapa FPsc v1.3 1629   A04: 18202348-18203976
Brara.E00783 (1 of 44) KOG0131 - Splicing factor 3b, subunit 4 B. rapa FPsc v1.3 1674   A05: 4532864-4534537
Brara.C01867 (1 of 1) KOG0131//KOG0144//KOG4210 - Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Nuclear localization sequence binding protein B. rapa FPsc v1.3 1680   A03: 9218890-9220569
Bostr.23794s0362 (1 of 26) KOG0131 - Splicing factor 3b, subunit 4 B. stricta v1.2 1951   Scaffold23794: 2096553-2098503
SapurV1A.0141s0130 (1 of 8) K11294 - nucleolin (NCL, NSR1) S. purpurea v1.0 2790   chr06: 11954345-11957134
SapurV1A.1634s0020 (1 of 8) K11294 - nucleolin (NCL, NSR1) S. purpurea v1.0 2479   chr16: 6292663-6295141
Manes.09G067800 (1 of 27) KOG0131 - Splicing factor 3b, subunit 4 M. esculenta v6.1 2845   Chromosome09: 9230759-9233603
Manes.08G008000 (1 of 27) KOG0131 - Splicing factor 3b, subunit 4 M. esculenta v6.1 2318   Chromosome08: 582167-584484
AL4G33590 (1 of 4) K11294 - nucleolin (NCL, NSR1) A. lyrata v2.1 1885   scaffold_4: 17800993-17802877
Potri.006G127200 (1 of 8) K11294 - nucleolin (NCL, NSR1) P. trichocarpa v3.1 3588   Chr06: 10314108-10317695
Potri.016G090700 (1 of 8) K11294 - nucleolin (NCL, NSR1) P. trichocarpa v3.1 2554   Chr16: 7438376-7440929
Podel.06G137300 (1 of 9) K11294 - nucleolin (NCL, NSR1) P. deltoides WV94 v2.1 3962   Chr06: 11291744-11295705
Podel.16G094500 (1 of 9) K11294 - nucleolin (NCL, NSR1) P. deltoides WV94 v2.1 2335   Chr16: 7780150-7782484
Carub.0004s1912 (1 of 3) K11294 - nucleolin (NCL, NSR1) C. rubella v1.1 1856   scaffold_4: 10653811-10655666

26 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10017023m E. salsugineum v1.0 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Lus10002222 L. usitatissimum v1.0 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5268 Malvidae
Brara.E00783.1.p B. rapa FPsc v1.3 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5268 Malvidae
Potri.006G127200.2.p P. trichocarpa v3.1 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
30078.m002323 R. communis v0.1 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
AT2G37220.1 A. thaliana TAIR10 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Ciclev10012331m C. clementina v1.0 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Lus10026514 L. usitatissimum v1.0 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5268 Malvidae
Lus10023191 L. usitatissimum v1.0 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5268 Malvidae
Gorai.009G416900.1 G. raimondii v2.1 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Gorai.006G166300.1 G. raimondii v2.1 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Thecc1EG022172t1 T. cacao v1.1 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Araha.14169s0015.1.p A. halleri v1.1 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Cagra.0666s0022.1.p C. grandiflora v1.1 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Brara.C01867.1.p B. rapa FPsc v1.3 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5268 Malvidae
Brara.D02261.1.p B. rapa FPsc v1.3 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5268 Malvidae
Bostr.23794s0362.1.p B. stricta v1.2 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
SapurV1A.1634s0020.1.p S. purpurea v1.0 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
SapurV1A.0141s0130.1.p S. purpurea v1.0 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Manes.08G008000.1.p M. esculenta v6.1 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Manes.09G067800.1.p M. esculenta v6.1 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
AL4G33590.t1 A. lyrata v2.1 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Potri.016G090700.7.p P. trichocarpa v3.1 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Podel.16G094500.1.p P. deltoides WV94 v2.1 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Podel.06G137300.1.p P. deltoides WV94 v2.1 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Carub.0004s1912.1.p C. rubella v1.1 124238282 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae