Gene : Thecc1EG022172 T. cacao v1.1

Defline:  (1 of 3) K11294 - nucleolin (NCL, NSR1) Genomic Order:  588
Name:  ? Thecc1EG022172 Secondary Identifier:  ? PAC:27424295

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022172 0.5kb upstream 0.5kb upstream 3445 true scaffold_5: 2984190-2987634 Theobroma cacao
Thecc1EG022172 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2987135-2987634 Theobroma cacao
Thecc1EG022172 0.5kb downstream 0.5kb downstream 3445 true scaffold_5: 2983690-2987134 Theobroma cacao
Thecc1EG022172 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2983690-2984189 Theobroma cacao
Thecc1EG022172 1.0kb upstream 1.0kb upstream 3945 true scaffold_5: 2984190-2988134 Theobroma cacao
Thecc1EG022172 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2987135-2988134 Theobroma cacao
Thecc1EG022172 1.0kb downstream 1.0kb downstream 3945 true scaffold_5: 2983190-2987134 Theobroma cacao
Thecc1EG022172 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2983190-2984189 Theobroma cacao
Thecc1EG022172 2.0kb upstream 2.0kb upstream 4945 true scaffold_5: 2984190-2989134 Theobroma cacao
Thecc1EG022172 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2987135-2989134 Theobroma cacao
Thecc1EG022172 2.0kb downstream 2.0kb downstream 4945 true scaffold_5: 2982190-2987134 Theobroma cacao
Thecc1EG022172 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2982190-2984189 Theobroma cacao
Thecc1EG022172 5.0kb upstream 5.0kb upstream 7945 true scaffold_5: 2984190-2992134 Theobroma cacao
Thecc1EG022172 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2987135-2992134 Theobroma cacao
Thecc1EG022172 5.0kb downstream 5.0kb downstream 7945 true scaffold_5: 2979190-2987134 Theobroma cacao
Thecc1EG022172 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2979190-2984189 Theobroma cacao
Thecc1EG022172 10.0kb upstream 10.0kb upstream 12945 true scaffold_5: 2984190-2997134 Theobroma cacao
Thecc1EG022172 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2987135-2997134 Theobroma cacao
Thecc1EG022172 10.0kb downstream 10.0kb downstream 12945 true scaffold_5: 2974190-2987134 Theobroma cacao
Thecc1EG022172 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2974190-2984189 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040882 5273 Angiosperm View MSA
123839588 5264 Brassicales-Malvales View MSA
124338231 5266 SBM View MSA
124238282 5268 Malvidae View MSA
124066117 5270 Rosid View MSA
123752208 5271 Pentapetalae View MSA
122797685 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain