Gene : Thhalv10022579m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR23076:SF33 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Genomic Order:  254
Name:  ? Thhalv10022579m.g Secondary Identifier:  ? PAC:20202038
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10022579m.g 0.5kb upstream 0.5kb upstream 3407 true scaffold_11: 1960142-1963548 Eutrema salsugineum
Thhalv10022579m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_11: 1963049-1963548 Eutrema salsugineum
Thhalv10022579m.g 0.5kb downstream 0.5kb downstream 3407 true scaffold_11: 1959642-1963048 Eutrema salsugineum
Thhalv10022579m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_11: 1959642-1960141 Eutrema salsugineum
Thhalv10022579m.g 1.0kb upstream 1.0kb upstream 3907 true scaffold_11: 1960142-1964048 Eutrema salsugineum
Thhalv10022579m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_11: 1963049-1964048 Eutrema salsugineum
Thhalv10022579m.g 1.0kb downstream 1.0kb downstream 3907 true scaffold_11: 1959142-1963048 Eutrema salsugineum
Thhalv10022579m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_11: 1959142-1960141 Eutrema salsugineum
Thhalv10022579m.g 2.0kb upstream 2.0kb upstream 4907 true scaffold_11: 1960142-1965048 Eutrema salsugineum
Thhalv10022579m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_11: 1963049-1965048 Eutrema salsugineum
Thhalv10022579m.g 2.0kb downstream 2.0kb downstream 4907 true scaffold_11: 1958142-1963048 Eutrema salsugineum
Thhalv10022579m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_11: 1958142-1960141 Eutrema salsugineum
Thhalv10022579m.g 5.0kb upstream 5.0kb upstream 7907 true scaffold_11: 1960142-1968048 Eutrema salsugineum
Thhalv10022579m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_11: 1963049-1968048 Eutrema salsugineum
Thhalv10022579m.g 5.0kb downstream 5.0kb downstream 7907 true scaffold_11: 1955142-1963048 Eutrema salsugineum
Thhalv10022579m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_11: 1955142-1960141 Eutrema salsugineum
Thhalv10022579m.g 10.0kb upstream 10.0kb upstream 12907 true scaffold_11: 1960142-1973048 Eutrema salsugineum
Thhalv10022579m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_11: 1963049-1973048 Eutrema salsugineum
Thhalv10022579m.g 10.0kb downstream 10.0kb downstream 12907 true scaffold_11: 1950142-1963048 Eutrema salsugineum
Thhalv10022579m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_11: 1950142-1960141 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377880 5261 Brassicaceae View MSA
123838553 5264 Brassicales-Malvales View MSA
124337875 5266 SBM View MSA
124238414 5268 Malvidae View MSA
124060614 5270 Rosid View MSA
123737451 5271 Pentapetalae View MSA
122792150 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain