Gene : Thhalv10017531m.g E. salsugineum v1.0
Defline:  (1 of 4) PTHR13871:SF30 - CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN-RELATED Genomic Order:  1134
Name:  ? Thhalv10017531m.g Secondary Identifier:  ? PAC:20181110
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7039 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10017531m.g 0.5kb upstream 0.5kb upstream 1208 true scaffold_10: 9407669-9408876 Eutrema salsugineum
Thhalv10017531m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 9408377-9408876 Eutrema salsugineum
Thhalv10017531m.g 0.5kb downstream 0.5kb downstream 1208 true scaffold_10: 9407169-9408376 Eutrema salsugineum
Thhalv10017531m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 9407169-9407668 Eutrema salsugineum
Thhalv10017531m.g 1.0kb upstream 1.0kb upstream 1708 true scaffold_10: 9407669-9409376 Eutrema salsugineum
Thhalv10017531m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 9408377-9409376 Eutrema salsugineum
Thhalv10017531m.g 1.0kb downstream 1.0kb downstream 1708 true scaffold_10: 9406669-9408376 Eutrema salsugineum
Thhalv10017531m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 9406669-9407668 Eutrema salsugineum
Thhalv10017531m.g 2.0kb upstream 2.0kb upstream 2708 true scaffold_10: 9407669-9410376 Eutrema salsugineum
Thhalv10017531m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 9408377-9410376 Eutrema salsugineum
Thhalv10017531m.g 2.0kb downstream 2.0kb downstream 2708 true scaffold_10: 9405669-9408376 Eutrema salsugineum
Thhalv10017531m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 9405669-9407668 Eutrema salsugineum
Thhalv10017531m.g 5.0kb upstream 5.0kb upstream 5708 true scaffold_10: 9407669-9413376 Eutrema salsugineum
Thhalv10017531m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 9408377-9413376 Eutrema salsugineum
Thhalv10017531m.g 5.0kb downstream 5.0kb downstream 5708 true scaffold_10: 9402669-9408376 Eutrema salsugineum
Thhalv10017531m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 9402669-9407668 Eutrema salsugineum
Thhalv10017531m.g 10.0kb upstream 10.0kb upstream 10708 true scaffold_10: 9407669-9418376 Eutrema salsugineum
Thhalv10017531m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 9408377-9418376 Eutrema salsugineum
Thhalv10017531m.g 10.0kb downstream 10.0kb downstream 10708 true scaffold_10: 9397669-9408376 Eutrema salsugineum
Thhalv10017531m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 9397669-9407668 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122359694 5261 Brassicaceae View MSA
123797541 5264 Brassicales-Malvales View MSA
124295261 5266 SBM View MSA
124147713 5268 Malvidae View MSA
124052124 5270 Rosid View MSA
123750493 5271 Pentapetalae View MSA
122796546 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain