Gene : Thhalv10017645m.g E. salsugineum v1.0

Defline:  (1 of 1) PTHR23241:SF44 - LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN Genomic Order:  1621
Name:  ? Thhalv10017645m.g Secondary Identifier:  ? PAC:20180981

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10017645m.g 0.5kb upstream 0.5kb upstream 2155 true scaffold_10: 11638198-11640352 Eutrema salsugineum
Thhalv10017645m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 11639853-11640352 Eutrema salsugineum
Thhalv10017645m.g 0.5kb downstream 0.5kb downstream 2155 true scaffold_10: 11637698-11639852 Eutrema salsugineum
Thhalv10017645m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 11637698-11638197 Eutrema salsugineum
Thhalv10017645m.g 1.0kb upstream 1.0kb upstream 2655 true scaffold_10: 11638198-11640852 Eutrema salsugineum
Thhalv10017645m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 11639853-11640852 Eutrema salsugineum
Thhalv10017645m.g 1.0kb downstream 1.0kb downstream 2655 true scaffold_10: 11637198-11639852 Eutrema salsugineum
Thhalv10017645m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 11637198-11638197 Eutrema salsugineum
Thhalv10017645m.g 2.0kb upstream 2.0kb upstream 3655 true scaffold_10: 11638198-11641852 Eutrema salsugineum
Thhalv10017645m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 11639853-11641852 Eutrema salsugineum
Thhalv10017645m.g 2.0kb downstream 2.0kb downstream 3655 true scaffold_10: 11636198-11639852 Eutrema salsugineum
Thhalv10017645m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 11636198-11638197 Eutrema salsugineum
Thhalv10017645m.g 5.0kb upstream 5.0kb upstream 6655 true scaffold_10: 11638198-11644852 Eutrema salsugineum
Thhalv10017645m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 11639853-11644852 Eutrema salsugineum
Thhalv10017645m.g 5.0kb downstream 5.0kb downstream 6655 true scaffold_10: 11633198-11639852 Eutrema salsugineum
Thhalv10017645m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 11633198-11638197 Eutrema salsugineum
Thhalv10017645m.g 10.0kb upstream 10.0kb upstream 11655 true scaffold_10: 11638198-11649852 Eutrema salsugineum
Thhalv10017645m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 11639853-11649852 Eutrema salsugineum
Thhalv10017645m.g 10.0kb downstream 10.0kb downstream 11655 true scaffold_10: 11628198-11639852 Eutrema salsugineum
Thhalv10017645m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 11628198-11638197 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122356832 5261 Brassicaceae Singleton cluster - no MSA
123839140 5264 Brassicales-Malvales View MSA
124346780 5266 SBM View MSA
124253564 5268 Malvidae View MSA
124071734 5270 Rosid View MSA
123743630 5271 Pentapetalae View MSA
122796443 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain