Gene : Thhalv10020040m.g E. salsugineum v1.0
Defline:  (1 of 4) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  28
Name:  ? Thhalv10020040m.g Secondary Identifier:  ? PAC:20183713
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-4942 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10020040m.g 0.5kb upstream 0.5kb upstream 5140 true scaffold_13: 253331-258470 Eutrema salsugineum
Thhalv10020040m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 257971-258470 Eutrema salsugineum
Thhalv10020040m.g 0.5kb downstream 0.5kb downstream 5140 true scaffold_13: 252831-257970 Eutrema salsugineum
Thhalv10020040m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 252831-253330 Eutrema salsugineum
Thhalv10020040m.g 1.0kb upstream 1.0kb upstream 5640 true scaffold_13: 253331-258970 Eutrema salsugineum
Thhalv10020040m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 257971-258970 Eutrema salsugineum
Thhalv10020040m.g 1.0kb downstream 1.0kb downstream 5640 true scaffold_13: 252331-257970 Eutrema salsugineum
Thhalv10020040m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 252331-253330 Eutrema salsugineum
Thhalv10020040m.g 2.0kb upstream 2.0kb upstream 6640 true scaffold_13: 253331-259970 Eutrema salsugineum
Thhalv10020040m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 257971-259970 Eutrema salsugineum
Thhalv10020040m.g 2.0kb downstream 2.0kb downstream 6640 true scaffold_13: 251331-257970 Eutrema salsugineum
Thhalv10020040m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 251331-253330 Eutrema salsugineum
Thhalv10020040m.g 5.0kb upstream 5.0kb upstream 9640 true scaffold_13: 253331-262970 Eutrema salsugineum
Thhalv10020040m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 257971-262970 Eutrema salsugineum
Thhalv10020040m.g 5.0kb downstream 5.0kb downstream 9640 true scaffold_13: 248331-257970 Eutrema salsugineum
Thhalv10020040m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 248331-253330 Eutrema salsugineum
Thhalv10020040m.g 10.0kb upstream 10.0kb upstream 14640 true scaffold_13: 253331-267970 Eutrema salsugineum
Thhalv10020040m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 257971-267970 Eutrema salsugineum
Thhalv10020040m.g 10.0kb downstream 10.0kb downstream 14640 true scaffold_13: 243331-257970 Eutrema salsugineum
Thhalv10020040m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 243331-253330 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122359810 5261 Brassicaceae View MSA
123797645 5264 Brassicales-Malvales View MSA
124295363 5266 SBM View MSA
124251387 5268 Malvidae View MSA
124060864 5270 Rosid View MSA
123737400 5271 Pentapetalae View MSA
122792723 5272 Eudicot View MSA
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain