Gene : Thhalv10020392m.g E. salsugineum v1.0
Defline:  (1 of 4) PTHR11709:SF9 - LACCASE-7-RELATED Genomic Order:  1512
Name:  ? Thhalv10020392m.g Secondary Identifier:  ? PAC:20182422
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5466 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10020392m.g 0.5kb upstream 0.5kb upstream 4921 true scaffold_13: 6585180-6590100 Eutrema salsugineum
Thhalv10020392m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 6585180-6585679 Eutrema salsugineum
Thhalv10020392m.g 0.5kb downstream 0.5kb downstream 4921 true scaffold_13: 6585680-6590600 Eutrema salsugineum
Thhalv10020392m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 6590101-6590600 Eutrema salsugineum
Thhalv10020392m.g 1.0kb upstream 1.0kb upstream 5421 true scaffold_13: 6584680-6590100 Eutrema salsugineum
Thhalv10020392m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 6584680-6585679 Eutrema salsugineum
Thhalv10020392m.g 1.0kb downstream 1.0kb downstream 5421 true scaffold_13: 6585680-6591100 Eutrema salsugineum
Thhalv10020392m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 6590101-6591100 Eutrema salsugineum
Thhalv10020392m.g 2.0kb upstream 2.0kb upstream 6421 true scaffold_13: 6583680-6590100 Eutrema salsugineum
Thhalv10020392m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 6583680-6585679 Eutrema salsugineum
Thhalv10020392m.g 2.0kb downstream 2.0kb downstream 6421 true scaffold_13: 6585680-6592100 Eutrema salsugineum
Thhalv10020392m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 6590101-6592100 Eutrema salsugineum
Thhalv10020392m.g 5.0kb upstream 5.0kb upstream 9421 true scaffold_13: 6580680-6590100 Eutrema salsugineum
Thhalv10020392m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 6580680-6585679 Eutrema salsugineum
Thhalv10020392m.g 5.0kb downstream 5.0kb downstream 9421 true scaffold_13: 6585680-6595100 Eutrema salsugineum
Thhalv10020392m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 6590101-6595100 Eutrema salsugineum
Thhalv10020392m.g 10.0kb upstream 10.0kb upstream 14421 true scaffold_13: 6575680-6590100 Eutrema salsugineum
Thhalv10020392m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 6575680-6585679 Eutrema salsugineum
Thhalv10020392m.g 10.0kb downstream 10.0kb downstream 14421 true scaffold_13: 6585680-6600100 Eutrema salsugineum
Thhalv10020392m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 6590101-6600100 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365936 5261 Brassicaceae View MSA
123835955 5264 Brassicales-Malvales View MSA
124351381 5266 SBM View MSA
124241371 5268 Malvidae View MSA
124063010 5270 Rosid View MSA
123744163 5271 Pentapetalae View MSA
122787244 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain