Gene : Thhalv10020561m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR11851//PTHR11851:SF145 - METALLOPROTEASE Genomic Order:  768
Name:  ? Thhalv10020561m.g Secondary Identifier:  ? PAC:20183796
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3781 Eutrema salsugineum pathologic  
Esalsugineum PWY-7279 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10020561m.g 0.5kb upstream 0.5kb upstream 3846 true scaffold_13: 3748262-3752107 Eutrema salsugineum
Thhalv10020561m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 3751608-3752107 Eutrema salsugineum
Thhalv10020561m.g 0.5kb downstream 0.5kb downstream 3846 true scaffold_13: 3747762-3751607 Eutrema salsugineum
Thhalv10020561m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 3747762-3748261 Eutrema salsugineum
Thhalv10020561m.g 1.0kb upstream 1.0kb upstream 4346 true scaffold_13: 3748262-3752607 Eutrema salsugineum
Thhalv10020561m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 3751608-3752607 Eutrema salsugineum
Thhalv10020561m.g 1.0kb downstream 1.0kb downstream 4346 true scaffold_13: 3747262-3751607 Eutrema salsugineum
Thhalv10020561m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 3747262-3748261 Eutrema salsugineum
Thhalv10020561m.g 2.0kb upstream 2.0kb upstream 5346 true scaffold_13: 3748262-3753607 Eutrema salsugineum
Thhalv10020561m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 3751608-3753607 Eutrema salsugineum
Thhalv10020561m.g 2.0kb downstream 2.0kb downstream 5346 true scaffold_13: 3746262-3751607 Eutrema salsugineum
Thhalv10020561m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 3746262-3748261 Eutrema salsugineum
Thhalv10020561m.g 5.0kb upstream 5.0kb upstream 8346 true scaffold_13: 3748262-3756607 Eutrema salsugineum
Thhalv10020561m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 3751608-3756607 Eutrema salsugineum
Thhalv10020561m.g 5.0kb downstream 5.0kb downstream 8346 true scaffold_13: 3743262-3751607 Eutrema salsugineum
Thhalv10020561m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 3743262-3748261 Eutrema salsugineum
Thhalv10020561m.g 10.0kb upstream 10.0kb upstream 13346 true scaffold_13: 3748262-3761607 Eutrema salsugineum
Thhalv10020561m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 3751608-3761607 Eutrema salsugineum
Thhalv10020561m.g 10.0kb downstream 10.0kb downstream 13346 true scaffold_13: 3738262-3751607 Eutrema salsugineum
Thhalv10020561m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 3738262-3748261 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041394 5273 Angiosperm View MSA
122375459 5261 Brassicaceae View MSA
123837486 5264 Brassicales-Malvales View MSA
124346987 5266 SBM View MSA
124244870 5268 Malvidae View MSA
124064083 5270 Rosid View MSA
123738249 5271 Pentapetalae View MSA
122789346 5272 Eudicot View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain