Gene : Thhalv10021542m.g E. salsugineum v1.0
Defline:  (1 of 5) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  1277
Name:  ? Thhalv10021542m.g Secondary Identifier:  ? PAC:20183826
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10021542m.g 0.5kb upstream 0.5kb upstream 1514 true scaffold_13: 5721067-5722580 Eutrema salsugineum
Thhalv10021542m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 5722081-5722580 Eutrema salsugineum
Thhalv10021542m.g 0.5kb downstream 0.5kb downstream 1514 true scaffold_13: 5720567-5722080 Eutrema salsugineum
Thhalv10021542m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 5720567-5721066 Eutrema salsugineum
Thhalv10021542m.g 1.0kb upstream 1.0kb upstream 2014 true scaffold_13: 5721067-5723080 Eutrema salsugineum
Thhalv10021542m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 5722081-5723080 Eutrema salsugineum
Thhalv10021542m.g 1.0kb downstream 1.0kb downstream 2014 true scaffold_13: 5720067-5722080 Eutrema salsugineum
Thhalv10021542m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 5720067-5721066 Eutrema salsugineum
Thhalv10021542m.g 2.0kb upstream 2.0kb upstream 3014 true scaffold_13: 5721067-5724080 Eutrema salsugineum
Thhalv10021542m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 5722081-5724080 Eutrema salsugineum
Thhalv10021542m.g 2.0kb downstream 2.0kb downstream 3014 true scaffold_13: 5719067-5722080 Eutrema salsugineum
Thhalv10021542m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 5719067-5721066 Eutrema salsugineum
Thhalv10021542m.g 5.0kb upstream 5.0kb upstream 6014 true scaffold_13: 5721067-5727080 Eutrema salsugineum
Thhalv10021542m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 5722081-5727080 Eutrema salsugineum
Thhalv10021542m.g 5.0kb downstream 5.0kb downstream 6014 true scaffold_13: 5716067-5722080 Eutrema salsugineum
Thhalv10021542m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 5716067-5721066 Eutrema salsugineum
Thhalv10021542m.g 10.0kb upstream 10.0kb upstream 11014 true scaffold_13: 5721067-5732080 Eutrema salsugineum
Thhalv10021542m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 5722081-5732080 Eutrema salsugineum
Thhalv10021542m.g 10.0kb downstream 10.0kb downstream 11014 true scaffold_13: 5711067-5722080 Eutrema salsugineum
Thhalv10021542m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 5711067-5721066 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370133 5261 Brassicaceae View MSA
123840781 5264 Brassicales-Malvales View MSA
124340578 5266 SBM View MSA
124251067 5268 Malvidae View MSA
124067511 5270 Rosid View MSA
123750360 5271 Pentapetalae View MSA
122793226 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain