Gene : Thhalv10027732m.g E. salsugineum v1.0
Defline:  (1 of 1) 4.2.1.122 - Tryptophan synthase (indole-salvaging) / Tryptophan synthase beta-2 Genomic Order:  474
Name:  ? Thhalv10027732m.g Secondary Identifier:  ? PAC:20189432
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum TRPSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10027732m.g 0.5kb upstream 0.5kb upstream 3436 true scaffold_14: 5638986-5642421 Eutrema salsugineum
Thhalv10027732m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 5641922-5642421 Eutrema salsugineum
Thhalv10027732m.g 0.5kb downstream 0.5kb downstream 3436 true scaffold_14: 5638486-5641921 Eutrema salsugineum
Thhalv10027732m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 5638486-5638985 Eutrema salsugineum
Thhalv10027732m.g 1.0kb upstream 1.0kb upstream 3936 true scaffold_14: 5638986-5642921 Eutrema salsugineum
Thhalv10027732m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 5641922-5642921 Eutrema salsugineum
Thhalv10027732m.g 1.0kb downstream 1.0kb downstream 3936 true scaffold_14: 5637986-5641921 Eutrema salsugineum
Thhalv10027732m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 5637986-5638985 Eutrema salsugineum
Thhalv10027732m.g 2.0kb upstream 2.0kb upstream 4936 true scaffold_14: 5638986-5643921 Eutrema salsugineum
Thhalv10027732m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 5641922-5643921 Eutrema salsugineum
Thhalv10027732m.g 2.0kb downstream 2.0kb downstream 4936 true scaffold_14: 5636986-5641921 Eutrema salsugineum
Thhalv10027732m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 5636986-5638985 Eutrema salsugineum
Thhalv10027732m.g 5.0kb upstream 5.0kb upstream 7936 true scaffold_14: 5638986-5646921 Eutrema salsugineum
Thhalv10027732m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 5641922-5646921 Eutrema salsugineum
Thhalv10027732m.g 5.0kb downstream 5.0kb downstream 7936 true scaffold_14: 5633986-5641921 Eutrema salsugineum
Thhalv10027732m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 5633986-5638985 Eutrema salsugineum
Thhalv10027732m.g 10.0kb upstream 10.0kb upstream 12936 true scaffold_14: 5638986-5651921 Eutrema salsugineum
Thhalv10027732m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 5641922-5651921 Eutrema salsugineum
Thhalv10027732m.g 10.0kb downstream 10.0kb downstream 12936 true scaffold_14: 5628986-5641921 Eutrema salsugineum
Thhalv10027732m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 5628986-5638985 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361584 5261 Brassicaceae View MSA
123840024 5264 Brassicales-Malvales View MSA
124344821 5266 SBM View MSA
124242166 5268 Malvidae View MSA
124065122 5270 Rosid View MSA
123740538 5271 Pentapetalae View MSA
122790993 5272 Eudicot View MSA
122043348 5273 Angiosperm View MSA
121348084 5274 Embryophyte View MSA
123380724 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain