Gene : Thhalv10022319m.g E. salsugineum v1.0
Defline:  (1 of 1) 3.5.1.52//4.1.1.37 - Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase / N-oligosaccharide glycopeptidase // Uroporphyrinogen decarboxylase / Uroporphyrinogen-III carboxy-lyase Genomic Order:  937
Name:  ? Thhalv10022319m.g Secondary Identifier:  ? PAC:20182860
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum CHLOROPHYLL-SYN Eutrema salsugineum pathologic  
Esalsugineum HEME-BIOSYNTHESIS-II Eutrema salsugineum pathologic  
Esalsugineum PWY-5918 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10022319m.g 0.5kb upstream 0.5kb upstream 5074 true scaffold_13: 4364917-4369990 Eutrema salsugineum
Thhalv10022319m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 4369491-4369990 Eutrema salsugineum
Thhalv10022319m.g 0.5kb downstream 0.5kb downstream 5074 true scaffold_13: 4364417-4369490 Eutrema salsugineum
Thhalv10022319m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 4364417-4364916 Eutrema salsugineum
Thhalv10022319m.g 1.0kb upstream 1.0kb upstream 5574 true scaffold_13: 4364917-4370490 Eutrema salsugineum
Thhalv10022319m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 4369491-4370490 Eutrema salsugineum
Thhalv10022319m.g 1.0kb downstream 1.0kb downstream 5574 true scaffold_13: 4363917-4369490 Eutrema salsugineum
Thhalv10022319m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 4363917-4364916 Eutrema salsugineum
Thhalv10022319m.g 2.0kb upstream 2.0kb upstream 6574 true scaffold_13: 4364917-4371490 Eutrema salsugineum
Thhalv10022319m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 4369491-4371490 Eutrema salsugineum
Thhalv10022319m.g 2.0kb downstream 2.0kb downstream 6574 true scaffold_13: 4362917-4369490 Eutrema salsugineum
Thhalv10022319m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 4362917-4364916 Eutrema salsugineum
Thhalv10022319m.g 5.0kb upstream 5.0kb upstream 9574 true scaffold_13: 4364917-4374490 Eutrema salsugineum
Thhalv10022319m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 4369491-4374490 Eutrema salsugineum
Thhalv10022319m.g 5.0kb downstream 5.0kb downstream 9574 true scaffold_13: 4359917-4369490 Eutrema salsugineum
Thhalv10022319m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 4359917-4364916 Eutrema salsugineum
Thhalv10022319m.g 10.0kb upstream 10.0kb upstream 14574 true scaffold_13: 4364917-4379490 Eutrema salsugineum
Thhalv10022319m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 4369491-4379490 Eutrema salsugineum
Thhalv10022319m.g 10.0kb downstream 10.0kb downstream 14574 true scaffold_13: 4354917-4369490 Eutrema salsugineum
Thhalv10022319m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 4354917-4364916 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122357163 5261 Brassicaceae Singleton cluster - no MSA
123839031 5264 Brassicales-Malvales View MSA
124322540 5266 SBM View MSA
124254669 5268 Malvidae View MSA
124072866 5270 Rosid View MSA
123749062 5271 Pentapetalae View MSA
122793704 5272 Eudicot View MSA
122047638 5273 Angiosperm View MSA
121344579 5274 Embryophyte View MSA
123380069 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain