Gene : Thhalv10028230m.g E. salsugineum v1.0
Defline:  (1 of 6) 6.5.1.1 - DNA ligase (ATP) / Sealase Genomic Order:  434
Name:  ? Thhalv10028230m.g Secondary Identifier:  ? PAC:20189558
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10028230m.g 0.5kb upstream 0.5kb upstream 4438 true scaffold_14: 5218407-5222844 Eutrema salsugineum
Thhalv10028230m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 5222345-5222844 Eutrema salsugineum
Thhalv10028230m.g 0.5kb downstream 0.5kb downstream 4438 true scaffold_14: 5217907-5222344 Eutrema salsugineum
Thhalv10028230m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 5217907-5218406 Eutrema salsugineum
Thhalv10028230m.g 1.0kb upstream 1.0kb upstream 4938 true scaffold_14: 5218407-5223344 Eutrema salsugineum
Thhalv10028230m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 5222345-5223344 Eutrema salsugineum
Thhalv10028230m.g 1.0kb downstream 1.0kb downstream 4938 true scaffold_14: 5217407-5222344 Eutrema salsugineum
Thhalv10028230m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 5217407-5218406 Eutrema salsugineum
Thhalv10028230m.g 2.0kb upstream 2.0kb upstream 5938 true scaffold_14: 5218407-5224344 Eutrema salsugineum
Thhalv10028230m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 5222345-5224344 Eutrema salsugineum
Thhalv10028230m.g 2.0kb downstream 2.0kb downstream 5938 true scaffold_14: 5216407-5222344 Eutrema salsugineum
Thhalv10028230m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 5216407-5218406 Eutrema salsugineum
Thhalv10028230m.g 5.0kb upstream 5.0kb upstream 8938 true scaffold_14: 5218407-5227344 Eutrema salsugineum
Thhalv10028230m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 5222345-5227344 Eutrema salsugineum
Thhalv10028230m.g 5.0kb downstream 5.0kb downstream 8938 true scaffold_14: 5213407-5222344 Eutrema salsugineum
Thhalv10028230m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 5213407-5218406 Eutrema salsugineum
Thhalv10028230m.g 10.0kb upstream 10.0kb upstream 13938 true scaffold_14: 5218407-5232344 Eutrema salsugineum
Thhalv10028230m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 5222345-5232344 Eutrema salsugineum
Thhalv10028230m.g 10.0kb downstream 10.0kb downstream 13938 true scaffold_14: 5208407-5222344 Eutrema salsugineum
Thhalv10028230m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 5208407-5218406 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122357296 5261 Brassicaceae Singleton cluster - no MSA
123795353 5264 Brassicales-Malvales Singleton cluster - no MSA
124293138 5266 SBM Singleton cluster - no MSA
124250422 5268 Malvidae View MSA
124070190 5270 Rosid View MSA
123746296 5271 Pentapetalae View MSA
122793355 5272 Eudicot View MSA
122047557 5273 Angiosperm View MSA
121348285 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain