Gene : Thhalv10010334m.g E. salsugineum v1.0
Defline:  (1 of 1) 2.4.2.10 - Orotate phosphoribosyltransferase / Orotidylic acid phosphorylase Genomic Order:  144
Name:  ? Thhalv10010334m.g Secondary Identifier:  ? PAC:20206757
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY0-162 Eutrema salsugineum pathologic  
Esalsugineum PWY-5686 Eutrema salsugineum pathologic  
Esalsugineum PWY-7211 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10010334m.g 0.5kb upstream 0.5kb upstream 2736 true scaffold_16: 676602-679337 Eutrema salsugineum
Thhalv10010334m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 676602-677101 Eutrema salsugineum
Thhalv10010334m.g 0.5kb downstream 0.5kb downstream 2736 true scaffold_16: 677102-679837 Eutrema salsugineum
Thhalv10010334m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 679338-679837 Eutrema salsugineum
Thhalv10010334m.g 1.0kb upstream 1.0kb upstream 3236 true scaffold_16: 676102-679337 Eutrema salsugineum
Thhalv10010334m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 676102-677101 Eutrema salsugineum
Thhalv10010334m.g 1.0kb downstream 1.0kb downstream 3236 true scaffold_16: 677102-680337 Eutrema salsugineum
Thhalv10010334m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 679338-680337 Eutrema salsugineum
Thhalv10010334m.g 2.0kb upstream 2.0kb upstream 4236 true scaffold_16: 675102-679337 Eutrema salsugineum
Thhalv10010334m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 675102-677101 Eutrema salsugineum
Thhalv10010334m.g 2.0kb downstream 2.0kb downstream 4236 true scaffold_16: 677102-681337 Eutrema salsugineum
Thhalv10010334m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 679338-681337 Eutrema salsugineum
Thhalv10010334m.g 5.0kb upstream 5.0kb upstream 7236 true scaffold_16: 672102-679337 Eutrema salsugineum
Thhalv10010334m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 672102-677101 Eutrema salsugineum
Thhalv10010334m.g 5.0kb downstream 5.0kb downstream 7236 true scaffold_16: 677102-684337 Eutrema salsugineum
Thhalv10010334m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 679338-684337 Eutrema salsugineum
Thhalv10010334m.g 10.0kb upstream 10.0kb upstream 12236 true scaffold_16: 667102-679337 Eutrema salsugineum
Thhalv10010334m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 667102-677101 Eutrema salsugineum
Thhalv10010334m.g 10.0kb downstream 10.0kb downstream 12236 true scaffold_16: 677102-689337 Eutrema salsugineum
Thhalv10010334m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 679338-689337 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374061 5261 Brassicaceae View MSA
123840006 5264 Brassicales-Malvales View MSA
124338602 5266 SBM View MSA
124250162 5268 Malvidae View MSA
124060638 5270 Rosid View MSA
123751852 5271 Pentapetalae View MSA
122789079 5272 Eudicot View MSA
122042153 5273 Angiosperm View MSA
121351237 5274 Embryophyte View MSA
123424950 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain