Gene : Thhalv10010325m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR23321//PTHR23321:SF33 - RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR Genomic Order:  969
Name:  ? Thhalv10010325m.g Secondary Identifier:  ? PAC:20207667
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum CALVIN-PWY Eutrema salsugineum pathologic  
Esalsugineum PHOTOALL-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-5723 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10010325m.g 0.5kb upstream 0.5kb upstream 2149 true scaffold_16: 5908697-5910845 Eutrema salsugineum
Thhalv10010325m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 5910346-5910845 Eutrema salsugineum
Thhalv10010325m.g 0.5kb downstream 0.5kb downstream 2149 true scaffold_16: 5908197-5910345 Eutrema salsugineum
Thhalv10010325m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 5908197-5908696 Eutrema salsugineum
Thhalv10010325m.g 1.0kb upstream 1.0kb upstream 2649 true scaffold_16: 5908697-5911345 Eutrema salsugineum
Thhalv10010325m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 5910346-5911345 Eutrema salsugineum
Thhalv10010325m.g 1.0kb downstream 1.0kb downstream 2649 true scaffold_16: 5907697-5910345 Eutrema salsugineum
Thhalv10010325m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 5907697-5908696 Eutrema salsugineum
Thhalv10010325m.g 2.0kb upstream 2.0kb upstream 3649 true scaffold_16: 5908697-5912345 Eutrema salsugineum
Thhalv10010325m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 5910346-5912345 Eutrema salsugineum
Thhalv10010325m.g 2.0kb downstream 2.0kb downstream 3649 true scaffold_16: 5906697-5910345 Eutrema salsugineum
Thhalv10010325m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 5906697-5908696 Eutrema salsugineum
Thhalv10010325m.g 5.0kb upstream 5.0kb upstream 6649 true scaffold_16: 5908697-5915345 Eutrema salsugineum
Thhalv10010325m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 5910346-5915345 Eutrema salsugineum
Thhalv10010325m.g 5.0kb downstream 5.0kb downstream 6649 true scaffold_16: 5903697-5910345 Eutrema salsugineum
Thhalv10010325m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 5903697-5908696 Eutrema salsugineum
Thhalv10010325m.g 10.0kb upstream 10.0kb upstream 11649 true scaffold_16: 5908697-5920345 Eutrema salsugineum
Thhalv10010325m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 5910346-5920345 Eutrema salsugineum
Thhalv10010325m.g 10.0kb downstream 10.0kb downstream 11649 true scaffold_16: 5898697-5910345 Eutrema salsugineum
Thhalv10010325m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 5898697-5908696 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379366 5261 Brassicaceae View MSA
123832933 5264 Brassicales-Malvales View MSA
124321833 5266 SBM View MSA
124244813 5268 Malvidae View MSA
124038153 5270 Rosid View MSA
123753610 5271 Pentapetalae View MSA
122775167 5272 Eudicot View MSA
122051023 5273 Angiosperm View MSA
121312251 5274 Embryophyte View MSA
123428195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain