Gene : Thhalv10003271m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR23418:SF4 - 1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4 Genomic Order:  66
Name:  ? Thhalv10003271m.g Secondary Identifier:  ? PAC:20208118
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-4361 Eutrema salsugineum pathologic  
Esalsugineum PWY-7270 Eutrema salsugineum pathologic  
Esalsugineum PWY-7528 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003271m.g 0.5kb upstream 0.5kb upstream 3112 true scaffold_17: 614131-617242 Eutrema salsugineum
Thhalv10003271m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_17: 614131-614630 Eutrema salsugineum
Thhalv10003271m.g 0.5kb downstream 0.5kb downstream 3112 true scaffold_17: 614631-617742 Eutrema salsugineum
Thhalv10003271m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_17: 617243-617742 Eutrema salsugineum
Thhalv10003271m.g 1.0kb upstream 1.0kb upstream 3612 true scaffold_17: 613631-617242 Eutrema salsugineum
Thhalv10003271m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_17: 613631-614630 Eutrema salsugineum
Thhalv10003271m.g 1.0kb downstream 1.0kb downstream 3612 true scaffold_17: 614631-618242 Eutrema salsugineum
Thhalv10003271m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_17: 617243-618242 Eutrema salsugineum
Thhalv10003271m.g 2.0kb upstream 2.0kb upstream 4612 true scaffold_17: 612631-617242 Eutrema salsugineum
Thhalv10003271m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_17: 612631-614630 Eutrema salsugineum
Thhalv10003271m.g 2.0kb downstream 2.0kb downstream 4612 true scaffold_17: 614631-619242 Eutrema salsugineum
Thhalv10003271m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_17: 617243-619242 Eutrema salsugineum
Thhalv10003271m.g 5.0kb upstream 5.0kb upstream 7612 true scaffold_17: 609631-617242 Eutrema salsugineum
Thhalv10003271m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_17: 609631-614630 Eutrema salsugineum
Thhalv10003271m.g 5.0kb downstream 5.0kb downstream 7612 true scaffold_17: 614631-622242 Eutrema salsugineum
Thhalv10003271m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_17: 617243-622242 Eutrema salsugineum
Thhalv10003271m.g 10.0kb upstream 10.0kb upstream 12612 true scaffold_17: 604631-617242 Eutrema salsugineum
Thhalv10003271m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_17: 604631-614630 Eutrema salsugineum
Thhalv10003271m.g 10.0kb downstream 10.0kb downstream 12612 true scaffold_17: 614631-627242 Eutrema salsugineum
Thhalv10003271m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_17: 617243-627242 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370454 5261 Brassicaceae View MSA
123834672 5264 Brassicales-Malvales View MSA
124342820 5266 SBM View MSA
124240096 5268 Malvidae View MSA
124070684 5270 Rosid View MSA
123741202 5271 Pentapetalae View MSA
122793339 5272 Eudicot View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain