Gene : Thhalv10005877m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR10543:SF37 - CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1 Genomic Order:  6
Name:  ? Thhalv10005877m.g Secondary Identifier:  ? PAC:20190338
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10005877m.g 0.5kb upstream 0.5kb upstream 4070 true scaffold_19: 13658-17727 Eutrema salsugineum
Thhalv10005877m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_19: 17228-17727 Eutrema salsugineum
Thhalv10005877m.g 0.5kb downstream 0.5kb downstream 4070 true scaffold_19: 13158-17227 Eutrema salsugineum
Thhalv10005877m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_19: 13158-13657 Eutrema salsugineum
Thhalv10005877m.g 1.0kb upstream 1.0kb upstream 4570 true scaffold_19: 13658-18227 Eutrema salsugineum
Thhalv10005877m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_19: 17228-18227 Eutrema salsugineum
Thhalv10005877m.g 1.0kb downstream 1.0kb downstream 4570 true scaffold_19: 12658-17227 Eutrema salsugineum
Thhalv10005877m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_19: 12658-13657 Eutrema salsugineum
Thhalv10005877m.g 2.0kb upstream 2.0kb upstream 5570 true scaffold_19: 13658-19227 Eutrema salsugineum
Thhalv10005877m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_19: 17228-19227 Eutrema salsugineum
Thhalv10005877m.g 2.0kb downstream 2.0kb downstream 5570 true scaffold_19: 11658-17227 Eutrema salsugineum
Thhalv10005877m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_19: 11658-13657 Eutrema salsugineum
Thhalv10005877m.g 5.0kb upstream 5.0kb upstream 8570 true scaffold_19: 13658-22227 Eutrema salsugineum
Thhalv10005877m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_19: 17228-22227 Eutrema salsugineum
Thhalv10005877m.g 5.0kb downstream 5.0kb downstream 8570 true scaffold_19: 8658-17227 Eutrema salsugineum
Thhalv10005877m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_19: 8658-13657 Eutrema salsugineum
Thhalv10005877m.g 10.0kb upstream 10.0kb upstream 13570 true scaffold_19: 13658-27227 Eutrema salsugineum
Thhalv10005877m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_19: 17228-27227 Eutrema salsugineum
Thhalv10005877m.g 10.0kb downstream 10.0kb downstream 13570 true scaffold_19: 3658-17227 Eutrema salsugineum
Thhalv10005877m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_19: 3658-13657 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367402 5261 Brassicaceae View MSA
123828703 5264 Brassicales-Malvales View MSA
124341776 5266 SBM View MSA
124236876 5268 Malvidae View MSA
124065010 5270 Rosid View MSA
123749061 5271 Pentapetalae View MSA
122787138 5272 Eudicot View MSA
122045403 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain