Protein Family : carotenoid cleavage dioxygenase 1 124236876

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  19

19 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29864.t000077 (1 of 3) K11159 - carotenoid cleavage dioxygenase (K11159) R. communis v0.1 7149   29864: 1123251-1130399
AT3G63520 (1 of 1) K11159 - carotenoid cleavage dioxygenase (K11159) A. thaliana TAIR10 CCD1 3168   Chr3: 23452911-23456078
Thhalv10005877m.g (1 of 1) PTHR10543:SF37 - CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1 E. salsugineum v1.0 3570   scaffold_19: 13658-17227
Ciclev10031039m.g (1 of 2) PTHR10543:SF37 - CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1 C. clementina v1.0 4688   scaffold_4: 25506446-25511133
Lus10029513.g (1 of 1) PF03055//PF04434 - Retinal pigment epithelial membrane protein (RPE65) // SWIM zinc finger (SWIM) L. usitatissimum v1.0 23147   scaffold55: 553395-576541
Gorai.004G066100 (1 of 1) PTHR10543:SF37 - CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1 G. raimondii v2.1 6197   Chr04: 6770079-6776275
Thecc1EG005874 (1 of 1) PTHR10543//PTHR10543:SF37 - BETA-CAROTENE DIOXYGENASE // CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1 T. cacao v1.1 6776   scaffold_1: 38621277-38628052
Araha.0297s0008 (1 of 1) PTHR10543:SF37 - CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1 A. halleri v1.1 3165   Scaffold297: 31315-34479
Cagra.0664s0081 (1 of 2) PTHR10543:SF37 - CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1 C. grandiflora v1.1 3388   Scaffold664: 281991-285378
Brara.D00005 (1 of 3) PTHR10543:SF37 - CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1 B. rapa FPsc v1.3 3105   A04: 20405-23509
Bostr.13158s0357 (1 of 1) PTHR10543:SF37 - CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1 B. stricta v1.2 3111   Scaffold13158: 1617540-1620650
SapurV1A.2739s0020 (1 of 4) K11159 - carotenoid cleavage dioxygenase (K11159) S. purpurea v1.0 8218   chr09: 5296511-5304728
Manes.10G141300 (1 of 1) PTHR10543:SF37 - CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1 M. esculenta v6.1 6172   Chromosome10: 25249342-25255513
AL5G46380 (1 of 1) K11159 - carotenoid cleavage dioxygenase (K11159) A. lyrata v2.1 3326   scaffold_5: 21206404-21209729
Potri.001G265400 (1 of 7) K11159 - carotenoid cleavage dioxygenase (K11159) P. trichocarpa v3.1 8084   Chr01: 27348904-27356987
Potri.009G060500 (1 of 7) K11159 - carotenoid cleavage dioxygenase (K11159) P. trichocarpa v3.1 8407   Chr09: 6255669-6264075
Podel.01G281600 (1 of 4) K11159 - carotenoid cleavage dioxygenase (K11159) P. deltoides WV94 v2.1 7442   Chr01: 28891624-28899065
Podel.09G062200 (1 of 4) K11159 - carotenoid cleavage dioxygenase (K11159) P. deltoides WV94 v2.1 8289   Chr09: 6276799-6285087
Carub.0005s3013 (1 of 3) K11159 - carotenoid cleavage dioxygenase (K11159) C. rubella v1.1 3396   scaffold_5: 13708863-13712258

19 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29864.m001501 R. communis v0.1 124236876 carotenoid cleavage dioxygenase 1 1 5268 Malvidae
Carub.0005s3013.1.p C. rubella v1.1 124236876 carotenoid cleavage dioxygenase 1 1 5268 Malvidae
AT3G63520.1 A. thaliana TAIR10 124236876 carotenoid cleavage dioxygenase 1 1 5268 Malvidae
Thhalv10005877m E. salsugineum v1.0 124236876 carotenoid cleavage dioxygenase 1 1 5268 Malvidae
Ciclev10031039m C. clementina v1.0 124236876 carotenoid cleavage dioxygenase 1 1 5268 Malvidae
Lus10029513 L. usitatissimum v1.0 124236876 carotenoid cleavage dioxygenase 1 1 5268 Malvidae
Gorai.004G066100.1 G. raimondii v2.1 124236876 carotenoid cleavage dioxygenase 1 1 5268 Malvidae
Thecc1EG005874t1 T. cacao v1.1 124236876 carotenoid cleavage dioxygenase 1 1 5268 Malvidae
Araha.0297s0008.1.p A. halleri v1.1 124236876 carotenoid cleavage dioxygenase 1 1 5268 Malvidae
Cagra.0664s0081.1.p C. grandiflora v1.1 124236876 carotenoid cleavage dioxygenase 1 1 5268 Malvidae
Brara.D00005.1.p B. rapa FPsc v1.3 124236876 carotenoid cleavage dioxygenase 1 1 5268 Malvidae
Bostr.13158s0357.1.p B. stricta v1.2 124236876 carotenoid cleavage dioxygenase 1 1 5268 Malvidae
SapurV1A.2739s0020.1.p S. purpurea v1.0 124236876 carotenoid cleavage dioxygenase 1 1 5268 Malvidae
Manes.10G141300.1.p M. esculenta v6.1 124236876 carotenoid cleavage dioxygenase 1 1 5268 Malvidae
AL5G46380.t1 A. lyrata v2.1 124236876 carotenoid cleavage dioxygenase 1 1 5268 Malvidae
Potri.001G265400.1.p P. trichocarpa v3.1 124236876 carotenoid cleavage dioxygenase 1 2 5268 Malvidae
Potri.009G060500.2.p P. trichocarpa v3.1 124236876 carotenoid cleavage dioxygenase 1 2 5268 Malvidae
Podel.01G281600.1.p P. deltoides WV94 v2.1 124236876 carotenoid cleavage dioxygenase 1 2 5268 Malvidae
Podel.09G062200.1.p P. deltoides WV94 v2.1 124236876 carotenoid cleavage dioxygenase 1 2 5268 Malvidae