Gene : AL5G46380 A. lyrata v2.1
Defline:  (1 of 1) K11159 - carotenoid cleavage dioxygenase (K11159) Genomic Order:  3282
Name:  ? AL5G46380 Secondary Identifier:  ? PAC:35920052
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G46380 0.5kb upstream 0.5kb upstream 3826   true scaffold_5: 21205904-21209729 Arabidopsis lyrata
AL5G46380 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 21205904-21206403 Arabidopsis lyrata
AL5G46380 0.5kb downstream 0.5kb downstream 3826   true scaffold_5: 21206404-21210229 Arabidopsis lyrata
AL5G46380 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 21209730-21210229 Arabidopsis lyrata
AL5G46380 1.0kb upstream 1.0kb upstream 4326   true scaffold_5: 21205404-21209729 Arabidopsis lyrata
AL5G46380 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 21205404-21206403 Arabidopsis lyrata
AL5G46380 1.0kb downstream 1.0kb downstream 4326   true scaffold_5: 21206404-21210729 Arabidopsis lyrata
AL5G46380 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 21209730-21210729 Arabidopsis lyrata
AL5G46380 2.0kb upstream 2.0kb upstream 5326   true scaffold_5: 21204404-21209729 Arabidopsis lyrata
AL5G46380 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 21204404-21206403 Arabidopsis lyrata
AL5G46380 2.0kb downstream 2.0kb downstream 5326   true scaffold_5: 21206404-21211729 Arabidopsis lyrata
AL5G46380 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 21209730-21211729 Arabidopsis lyrata
AL5G46380 5.0kb upstream 5.0kb upstream 8326   true scaffold_5: 21201404-21209729 Arabidopsis lyrata
AL5G46380 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 21201404-21206403 Arabidopsis lyrata
AL5G46380 5.0kb downstream 5.0kb downstream 8326   true scaffold_5: 21206404-21214729 Arabidopsis lyrata
AL5G46380 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 21209730-21214729 Arabidopsis lyrata
AL5G46380 10.0kb upstream 10.0kb upstream 13326   true scaffold_5: 21196404-21209729 Arabidopsis lyrata
AL5G46380 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 21196404-21206403 Arabidopsis lyrata
AL5G46380 10.0kb downstream 10.0kb downstream 13326   true scaffold_5: 21206404-21219729 Arabidopsis lyrata
AL5G46380 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 21209730-21219729 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367402 5261 Brassicaceae View MSA
123828703 5264 Brassicales-Malvales View MSA
124341776 5266 SBM View MSA
124236876 5268 Malvidae View MSA
124065010 5270 Rosid View MSA
123749061 5271 Pentapetalae View MSA
122787138 5272 Eudicot View MSA
122045403 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain