Gene : Carub.0005s3013 C. rubella v1.1
Defline:  (1 of 3) K11159 - carotenoid cleavage dioxygenase (K11159) Genomic Order:  3013
Name:  ? Carub.0005s3013 Secondary Identifier:  ? PAC:39226462
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s3013 0.5kb upstream 0.5kb upstream 3896 true scaffold_5: 13708363-13712258 Capsella rubella
Carub.0005s3013 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13708363-13708862 Capsella rubella
Carub.0005s3013 0.5kb downstream 0.5kb downstream 3896 true scaffold_5: 13708863-13712758 Capsella rubella
Carub.0005s3013 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13712259-13712758 Capsella rubella
Carub.0005s3013 1.0kb upstream 1.0kb upstream 4396 true scaffold_5: 13707863-13712258 Capsella rubella
Carub.0005s3013 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13707863-13708862 Capsella rubella
Carub.0005s3013 1.0kb downstream 1.0kb downstream 4396 true scaffold_5: 13708863-13713258 Capsella rubella
Carub.0005s3013 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13712259-13713258 Capsella rubella
Carub.0005s3013 2.0kb upstream 2.0kb upstream 5396 true scaffold_5: 13706863-13712258 Capsella rubella
Carub.0005s3013 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13706863-13708862 Capsella rubella
Carub.0005s3013 2.0kb downstream 2.0kb downstream 5396 true scaffold_5: 13708863-13714258 Capsella rubella
Carub.0005s3013 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13712259-13714258 Capsella rubella
Carub.0005s3013 5.0kb upstream 5.0kb upstream 8396 true scaffold_5: 13703863-13712258 Capsella rubella
Carub.0005s3013 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13703863-13708862 Capsella rubella
Carub.0005s3013 5.0kb downstream 5.0kb downstream 8396 true scaffold_5: 13708863-13717258 Capsella rubella
Carub.0005s3013 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13712259-13717258 Capsella rubella
Carub.0005s3013 10.0kb upstream 10.0kb upstream 13396 true scaffold_5: 13698863-13712258 Capsella rubella
Carub.0005s3013 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13698863-13708862 Capsella rubella
Carub.0005s3013 10.0kb downstream 10.0kb downstream 13396 true scaffold_5: 13708863-13722258 Capsella rubella
Carub.0005s3013 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13712259-13722258 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367402 5261 Brassicaceae View MSA
123828703 5264 Brassicales-Malvales View MSA
124341776 5266 SBM View MSA
124236876 5268 Malvidae View MSA
124065010 5270 Rosid View MSA
123749061 5271 Pentapetalae View MSA
122787138 5272 Eudicot View MSA
122045403 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain