Gene : Thhalv10005966m.g E. salsugineum v1.0
Defline:  (1 of 4) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  314
Name:  ? Thhalv10005966m.g Secondary Identifier:  ? PAC:20190730
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum GLYOXYLATE-BYPASS Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PWY-561 Eutrema salsugineum pathologic  
Esalsugineum PWY-5690 Eutrema salsugineum pathologic  
Esalsugineum PWY-6549 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10005966m.g 0.5kb upstream 0.5kb upstream 4724 true scaffold_19: 1216405-1221128 Eutrema salsugineum
Thhalv10005966m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_19: 1220629-1221128 Eutrema salsugineum
Thhalv10005966m.g 0.5kb downstream 0.5kb downstream 4724 true scaffold_19: 1215905-1220628 Eutrema salsugineum
Thhalv10005966m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_19: 1215905-1216404 Eutrema salsugineum
Thhalv10005966m.g 1.0kb upstream 1.0kb upstream 5224 true scaffold_19: 1216405-1221628 Eutrema salsugineum
Thhalv10005966m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_19: 1220629-1221628 Eutrema salsugineum
Thhalv10005966m.g 1.0kb downstream 1.0kb downstream 5224 true scaffold_19: 1215405-1220628 Eutrema salsugineum
Thhalv10005966m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_19: 1215405-1216404 Eutrema salsugineum
Thhalv10005966m.g 2.0kb upstream 2.0kb upstream 6224 true scaffold_19: 1216405-1222628 Eutrema salsugineum
Thhalv10005966m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_19: 1220629-1222628 Eutrema salsugineum
Thhalv10005966m.g 2.0kb downstream 2.0kb downstream 6224 true scaffold_19: 1214405-1220628 Eutrema salsugineum
Thhalv10005966m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_19: 1214405-1216404 Eutrema salsugineum
Thhalv10005966m.g 5.0kb upstream 5.0kb upstream 9224 true scaffold_19: 1216405-1225628 Eutrema salsugineum
Thhalv10005966m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_19: 1220629-1225628 Eutrema salsugineum
Thhalv10005966m.g 5.0kb downstream 5.0kb downstream 9224 true scaffold_19: 1211405-1220628 Eutrema salsugineum
Thhalv10005966m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_19: 1211405-1216404 Eutrema salsugineum
Thhalv10005966m.g 10.0kb upstream 10.0kb upstream 14224 true scaffold_19: 1216405-1230628 Eutrema salsugineum
Thhalv10005966m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_19: 1220629-1230628 Eutrema salsugineum
Thhalv10005966m.g 10.0kb downstream 10.0kb downstream 14224 true scaffold_19: 1206405-1220628 Eutrema salsugineum
Thhalv10005966m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_19: 1206405-1216404 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041314 5273 Angiosperm View MSA
122368215 5261 Brassicaceae View MSA
123799513 5264 Brassicales-Malvales View MSA
124297025 5266 SBM View MSA
124250397 5268 Malvidae View MSA
124068700 5270 Rosid View MSA
123737684 5271 Pentapetalae View MSA
122792616 5272 Eudicot View MSA
121345226 5274 Embryophyte View MSA
123424186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain