Gene : Thhalv10005927m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11751:SF284 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE-LIKE PROTEIN 1 Genomic Order:  186
Name:  ? Thhalv10005927m.g Secondary Identifier:  ? PAC:20190048
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ETHYL-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-7270 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10005927m.g 0.5kb upstream 0.5kb upstream 2726 true scaffold_19: 708785-711510 Eutrema salsugineum
Thhalv10005927m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_19: 708785-709284 Eutrema salsugineum
Thhalv10005927m.g 0.5kb downstream 0.5kb downstream 2726 true scaffold_19: 709285-712010 Eutrema salsugineum
Thhalv10005927m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_19: 711511-712010 Eutrema salsugineum
Thhalv10005927m.g 1.0kb upstream 1.0kb upstream 3226 true scaffold_19: 708285-711510 Eutrema salsugineum
Thhalv10005927m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_19: 708285-709284 Eutrema salsugineum
Thhalv10005927m.g 1.0kb downstream 1.0kb downstream 3226 true scaffold_19: 709285-712510 Eutrema salsugineum
Thhalv10005927m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_19: 711511-712510 Eutrema salsugineum
Thhalv10005927m.g 2.0kb upstream 2.0kb upstream 4226 true scaffold_19: 707285-711510 Eutrema salsugineum
Thhalv10005927m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_19: 707285-709284 Eutrema salsugineum
Thhalv10005927m.g 2.0kb downstream 2.0kb downstream 4226 true scaffold_19: 709285-713510 Eutrema salsugineum
Thhalv10005927m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_19: 711511-713510 Eutrema salsugineum
Thhalv10005927m.g 5.0kb upstream 5.0kb upstream 7226 true scaffold_19: 704285-711510 Eutrema salsugineum
Thhalv10005927m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_19: 704285-709284 Eutrema salsugineum
Thhalv10005927m.g 5.0kb downstream 5.0kb downstream 7226 true scaffold_19: 709285-716510 Eutrema salsugineum
Thhalv10005927m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_19: 711511-716510 Eutrema salsugineum
Thhalv10005927m.g 10.0kb upstream 10.0kb upstream 12226 true scaffold_19: 699285-711510 Eutrema salsugineum
Thhalv10005927m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_19: 699285-709284 Eutrema salsugineum
Thhalv10005927m.g 10.0kb downstream 10.0kb downstream 12226 true scaffold_19: 709285-721510 Eutrema salsugineum
Thhalv10005927m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_19: 711511-721510 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362081 5261 Brassicaceae View MSA
123841414 5264 Brassicales-Malvales View MSA
124344234 5266 SBM View MSA
124243868 5268 Malvidae View MSA
124064739 5270 Rosid View MSA
123742797 5271 Pentapetalae View MSA
122787155 5272 Eudicot View MSA
122050094 5273 Angiosperm View MSA
121311735 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain