Gene : Thhalv10015687m.g E. salsugineum v1.0
Defline:  (1 of 7) PTHR11685:SF107 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED Genomic Order:  957
Name:  ? Thhalv10015687m.g Secondary Identifier:  ? PAC:20203277
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7511 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10015687m.g 0.5kb upstream 0.5kb upstream 1125 true scaffold_2: 3664820-3665944 Eutrema salsugineum
Thhalv10015687m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3665445-3665944 Eutrema salsugineum
Thhalv10015687m.g 0.5kb downstream 0.5kb downstream 1125 true scaffold_2: 3664320-3665444 Eutrema salsugineum
Thhalv10015687m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3664320-3664819 Eutrema salsugineum
Thhalv10015687m.g 1.0kb upstream 1.0kb upstream 1625 true scaffold_2: 3664820-3666444 Eutrema salsugineum
Thhalv10015687m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3665445-3666444 Eutrema salsugineum
Thhalv10015687m.g 1.0kb downstream 1.0kb downstream 1625 true scaffold_2: 3663820-3665444 Eutrema salsugineum
Thhalv10015687m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3663820-3664819 Eutrema salsugineum
Thhalv10015687m.g 2.0kb upstream 2.0kb upstream 2625 true scaffold_2: 3664820-3667444 Eutrema salsugineum
Thhalv10015687m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3665445-3667444 Eutrema salsugineum
Thhalv10015687m.g 2.0kb downstream 2.0kb downstream 2625 true scaffold_2: 3662820-3665444 Eutrema salsugineum
Thhalv10015687m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3662820-3664819 Eutrema salsugineum
Thhalv10015687m.g 5.0kb upstream 5.0kb upstream 5625 true scaffold_2: 3664820-3670444 Eutrema salsugineum
Thhalv10015687m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3665445-3670444 Eutrema salsugineum
Thhalv10015687m.g 5.0kb downstream 5.0kb downstream 5625 true scaffold_2: 3659820-3665444 Eutrema salsugineum
Thhalv10015687m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3659820-3664819 Eutrema salsugineum
Thhalv10015687m.g 10.0kb upstream 10.0kb upstream 10625 true scaffold_2: 3664820-3675444 Eutrema salsugineum
Thhalv10015687m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3665445-3675444 Eutrema salsugineum
Thhalv10015687m.g 10.0kb downstream 10.0kb downstream 10625 true scaffold_2: 3654820-3665444 Eutrema salsugineum
Thhalv10015687m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3654820-3664819 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380583 5261 Brassicaceae View MSA
123841116 5264 Brassicales-Malvales View MSA
124337523 5266 SBM View MSA
124244924 5268 Malvidae View MSA
124068077 5270 Rosid View MSA
123752192 5271 Pentapetalae View MSA
122796967 5272 Eudicot View MSA
122046828 5273 Angiosperm View MSA
123429065 5275 Viridiplantae View MSA
121348618 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain