Gene : Thhalv10001530m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11183//PTHR11183:SF54 - GLYCOGENIN Genomic Order:  380
Name:  ? Thhalv10001530m.g Secondary Identifier:  ? PAC:20189225
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5337 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10001530m.g 0.5kb upstream 0.5kb upstream 1837 true scaffold_22: 1530369-1532205 Eutrema salsugineum
Thhalv10001530m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_22: 1531706-1532205 Eutrema salsugineum
Thhalv10001530m.g 0.5kb downstream 0.5kb downstream 1837 true scaffold_22: 1529869-1531705 Eutrema salsugineum
Thhalv10001530m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_22: 1529869-1530368 Eutrema salsugineum
Thhalv10001530m.g 1.0kb upstream 1.0kb upstream 2337 true scaffold_22: 1530369-1532705 Eutrema salsugineum
Thhalv10001530m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_22: 1531706-1532705 Eutrema salsugineum
Thhalv10001530m.g 1.0kb downstream 1.0kb downstream 2337 true scaffold_22: 1529369-1531705 Eutrema salsugineum
Thhalv10001530m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_22: 1529369-1530368 Eutrema salsugineum
Thhalv10001530m.g 2.0kb upstream 2.0kb upstream 3337 true scaffold_22: 1530369-1533705 Eutrema salsugineum
Thhalv10001530m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_22: 1531706-1533705 Eutrema salsugineum
Thhalv10001530m.g 2.0kb downstream 2.0kb downstream 3337 true scaffold_22: 1528369-1531705 Eutrema salsugineum
Thhalv10001530m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_22: 1528369-1530368 Eutrema salsugineum
Thhalv10001530m.g 5.0kb upstream 5.0kb upstream 6337 true scaffold_22: 1530369-1536705 Eutrema salsugineum
Thhalv10001530m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_22: 1531706-1536705 Eutrema salsugineum
Thhalv10001530m.g 5.0kb downstream 5.0kb downstream 6337 true scaffold_22: 1525369-1531705 Eutrema salsugineum
Thhalv10001530m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_22: 1525369-1530368 Eutrema salsugineum
Thhalv10001530m.g 10.0kb upstream 10.0kb upstream 11337 true scaffold_22: 1530369-1541705 Eutrema salsugineum
Thhalv10001530m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_22: 1531706-1541705 Eutrema salsugineum
Thhalv10001530m.g 10.0kb downstream 10.0kb downstream 11337 true scaffold_22: 1520369-1531705 Eutrema salsugineum
Thhalv10001530m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_22: 1520369-1530368 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365540 5261 Brassicaceae View MSA
123829587 5264 Brassicales-Malvales View MSA
124341086 5266 SBM View MSA
124253823 5268 Malvidae View MSA
124072040 5270 Rosid View MSA
123746069 5271 Pentapetalae View MSA
122793646 5272 Eudicot View MSA
122046900 5273 Angiosperm View MSA
121310671 5274 Embryophyte View MSA
123348097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain