Gene : Thhalv10001625m.g E. salsugineum v1.0

Defline:  (1 of 2) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide) Genomic Order:  169
Name:  ? Thhalv10001625m.g Secondary Identifier:  ? PAC:20189203

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10001625m.g 0.5kb upstream 0.5kb upstream 2881 true scaffold_22: 626543-629423 Eutrema salsugineum
Thhalv10001625m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_22: 626543-627042 Eutrema salsugineum
Thhalv10001625m.g 0.5kb downstream 0.5kb downstream 2881 true scaffold_22: 627043-629923 Eutrema salsugineum
Thhalv10001625m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_22: 629424-629923 Eutrema salsugineum
Thhalv10001625m.g 1.0kb upstream 1.0kb upstream 3381 true scaffold_22: 626043-629423 Eutrema salsugineum
Thhalv10001625m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_22: 626043-627042 Eutrema salsugineum
Thhalv10001625m.g 1.0kb downstream 1.0kb downstream 3381 true scaffold_22: 627043-630423 Eutrema salsugineum
Thhalv10001625m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_22: 629424-630423 Eutrema salsugineum
Thhalv10001625m.g 2.0kb upstream 2.0kb upstream 4381 true scaffold_22: 625043-629423 Eutrema salsugineum
Thhalv10001625m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_22: 625043-627042 Eutrema salsugineum
Thhalv10001625m.g 2.0kb downstream 2.0kb downstream 4381 true scaffold_22: 627043-631423 Eutrema salsugineum
Thhalv10001625m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_22: 629424-631423 Eutrema salsugineum
Thhalv10001625m.g 5.0kb upstream 5.0kb upstream 7381 true scaffold_22: 622043-629423 Eutrema salsugineum
Thhalv10001625m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_22: 622043-627042 Eutrema salsugineum
Thhalv10001625m.g 5.0kb downstream 5.0kb downstream 7381 true scaffold_22: 627043-634423 Eutrema salsugineum
Thhalv10001625m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_22: 629424-634423 Eutrema salsugineum
Thhalv10001625m.g 10.0kb upstream 10.0kb upstream 12381 true scaffold_22: 617043-629423 Eutrema salsugineum
Thhalv10001625m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_22: 617043-627042 Eutrema salsugineum
Thhalv10001625m.g 10.0kb downstream 10.0kb downstream 12381 true scaffold_22: 627043-639423 Eutrema salsugineum
Thhalv10001625m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_22: 629424-639423 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372703 5261 Brassicaceae View MSA
123830940 5264 Brassicales-Malvales View MSA
124347374 5266 SBM View MSA
124237000 5268 Malvidae View MSA
124068801 5270 Rosid View MSA
123737641 5271 Pentapetalae View MSA
122793224 5272 Eudicot View MSA
122045781 5273 Angiosperm View MSA
121346461 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain