Gene : Thhalv10028364m.g E. salsugineum v1.0

Defline:  (1 of 2) PTHR11361:SF89 - DNA MISMATCH REPAIR PROTEIN MSH6 Genomic Order:  195
Name:  ? Thhalv10028364m.g Secondary Identifier:  ? PAC:20197041

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10028364m.g 0.5kb upstream 0.5kb upstream 7617 true scaffold_3: 931753-939369 Eutrema salsugineum
Thhalv10028364m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 931753-932252 Eutrema salsugineum
Thhalv10028364m.g 0.5kb downstream 0.5kb downstream 7617 true scaffold_3: 932253-939869 Eutrema salsugineum
Thhalv10028364m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 939370-939869 Eutrema salsugineum
Thhalv10028364m.g 1.0kb upstream 1.0kb upstream 8117 true scaffold_3: 931253-939369 Eutrema salsugineum
Thhalv10028364m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 931253-932252 Eutrema salsugineum
Thhalv10028364m.g 1.0kb downstream 1.0kb downstream 8117 true scaffold_3: 932253-940369 Eutrema salsugineum
Thhalv10028364m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 939370-940369 Eutrema salsugineum
Thhalv10028364m.g 2.0kb upstream 2.0kb upstream 9117 true scaffold_3: 930253-939369 Eutrema salsugineum
Thhalv10028364m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 930253-932252 Eutrema salsugineum
Thhalv10028364m.g 2.0kb downstream 2.0kb downstream 9117 true scaffold_3: 932253-941369 Eutrema salsugineum
Thhalv10028364m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 939370-941369 Eutrema salsugineum
Thhalv10028364m.g 5.0kb upstream 5.0kb upstream 12117 true scaffold_3: 927253-939369 Eutrema salsugineum
Thhalv10028364m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 927253-932252 Eutrema salsugineum
Thhalv10028364m.g 5.0kb downstream 5.0kb downstream 12117 true scaffold_3: 932253-944369 Eutrema salsugineum
Thhalv10028364m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 939370-944369 Eutrema salsugineum
Thhalv10028364m.g 10.0kb upstream 10.0kb upstream 17117 true scaffold_3: 922253-939369 Eutrema salsugineum
Thhalv10028364m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 922253-932252 Eutrema salsugineum
Thhalv10028364m.g 10.0kb downstream 10.0kb downstream 17117 true scaffold_3: 932253-949369 Eutrema salsugineum
Thhalv10028364m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 939370-949369 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371889 5261 Brassicaceae View MSA
123831702 5264 Brassicales-Malvales View MSA
124346183 5266 SBM View MSA
124252379 5268 Malvidae View MSA
124062676 5270 Rosid View MSA
123736808 5271 Pentapetalae View MSA
122787445 5272 Eudicot View MSA
122041770 5273 Angiosperm View MSA
121347464 5274 Embryophyte View MSA
123426480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain