Gene : Thhalv10028384m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR12526:SF358 - SUCROSE-PHOSPHATE SYNTHASE 4-RELATED Genomic Order:  829
Name:  ? Thhalv10028384m.g Secondary Identifier:  ? PAC:20197940
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7238 Eutrema salsugineum pathologic  
Esalsugineum SUCSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10028384m.g 0.5kb upstream 0.5kb upstream 5626 true scaffold_3: 7327439-7333064 Eutrema salsugineum
Thhalv10028384m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7332565-7333064 Eutrema salsugineum
Thhalv10028384m.g 0.5kb downstream 0.5kb downstream 5626 true scaffold_3: 7326939-7332564 Eutrema salsugineum
Thhalv10028384m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7326939-7327438 Eutrema salsugineum
Thhalv10028384m.g 1.0kb upstream 1.0kb upstream 6126 true scaffold_3: 7327439-7333564 Eutrema salsugineum
Thhalv10028384m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7332565-7333564 Eutrema salsugineum
Thhalv10028384m.g 1.0kb downstream 1.0kb downstream 6126 true scaffold_3: 7326439-7332564 Eutrema salsugineum
Thhalv10028384m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7326439-7327438 Eutrema salsugineum
Thhalv10028384m.g 2.0kb upstream 2.0kb upstream 7126 true scaffold_3: 7327439-7334564 Eutrema salsugineum
Thhalv10028384m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7332565-7334564 Eutrema salsugineum
Thhalv10028384m.g 2.0kb downstream 2.0kb downstream 7126 true scaffold_3: 7325439-7332564 Eutrema salsugineum
Thhalv10028384m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7325439-7327438 Eutrema salsugineum
Thhalv10028384m.g 5.0kb upstream 5.0kb upstream 10126 true scaffold_3: 7327439-7337564 Eutrema salsugineum
Thhalv10028384m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7332565-7337564 Eutrema salsugineum
Thhalv10028384m.g 5.0kb downstream 5.0kb downstream 10126 true scaffold_3: 7322439-7332564 Eutrema salsugineum
Thhalv10028384m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7322439-7327438 Eutrema salsugineum
Thhalv10028384m.g 10.0kb upstream 10.0kb upstream 15126 true scaffold_3: 7327439-7342564 Eutrema salsugineum
Thhalv10028384m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7332565-7342564 Eutrema salsugineum
Thhalv10028384m.g 10.0kb downstream 10.0kb downstream 15126 true scaffold_3: 7317439-7332564 Eutrema salsugineum
Thhalv10028384m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7317439-7327438 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368905 5261 Brassicaceae View MSA
123828474 5264 Brassicales-Malvales View MSA
124344153 5266 SBM View MSA
124242048 5268 Malvidae View MSA
124060943 5270 Rosid View MSA
123740520 5271 Pentapetalae View MSA
122786711 5272 Eudicot View MSA
122049216 5273 Angiosperm View MSA
121347172 5274 Embryophyte View MSA
123427859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain