Gene : Thhalv10028941m.g E. salsugineum v1.0
Defline:  (1 of 1) 1.10.9.1 - Plastoquinol--plastocyanin reductase / Cytochrome b6f complex Genomic Order:  331
Name:  ? Thhalv10028941m.g Secondary Identifier:  ? PAC:20197975
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PHOTOALL-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-101 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10028941m.g 0.5kb upstream 0.5kb upstream 2427 true scaffold_3: 1655096-1657522 Eutrema salsugineum
Thhalv10028941m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1655096-1655595 Eutrema salsugineum
Thhalv10028941m.g 0.5kb downstream 0.5kb downstream 2427 true scaffold_3: 1655596-1658022 Eutrema salsugineum
Thhalv10028941m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1657523-1658022 Eutrema salsugineum
Thhalv10028941m.g 1.0kb upstream 1.0kb upstream 2927 true scaffold_3: 1654596-1657522 Eutrema salsugineum
Thhalv10028941m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1654596-1655595 Eutrema salsugineum
Thhalv10028941m.g 1.0kb downstream 1.0kb downstream 2927 true scaffold_3: 1655596-1658522 Eutrema salsugineum
Thhalv10028941m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1657523-1658522 Eutrema salsugineum
Thhalv10028941m.g 2.0kb upstream 2.0kb upstream 3927 true scaffold_3: 1653596-1657522 Eutrema salsugineum
Thhalv10028941m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1653596-1655595 Eutrema salsugineum
Thhalv10028941m.g 2.0kb downstream 2.0kb downstream 3927 true scaffold_3: 1655596-1659522 Eutrema salsugineum
Thhalv10028941m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1657523-1659522 Eutrema salsugineum
Thhalv10028941m.g 5.0kb upstream 5.0kb upstream 6927 true scaffold_3: 1650596-1657522 Eutrema salsugineum
Thhalv10028941m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1650596-1655595 Eutrema salsugineum
Thhalv10028941m.g 5.0kb downstream 5.0kb downstream 6927 true scaffold_3: 1655596-1662522 Eutrema salsugineum
Thhalv10028941m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1657523-1662522 Eutrema salsugineum
Thhalv10028941m.g 10.0kb upstream 10.0kb upstream 11927 true scaffold_3: 1645596-1657522 Eutrema salsugineum
Thhalv10028941m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1645596-1655595 Eutrema salsugineum
Thhalv10028941m.g 10.0kb downstream 10.0kb downstream 11927 true scaffold_3: 1655596-1667522 Eutrema salsugineum
Thhalv10028941m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1657523-1667522 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377793 5261 Brassicaceae View MSA
123831988 5264 Brassicales-Malvales View MSA
124337057 5266 SBM View MSA
124239989 5268 Malvidae View MSA
124073060 5270 Rosid View MSA
123737463 5271 Pentapetalae View MSA
122790798 5272 Eudicot View MSA
122045987 5273 Angiosperm View MSA
121343796 5274 Embryophyte View MSA
123424591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain