Gene : Thhalv10028795m.g E. salsugineum v1.0
Defline:  (1 of 1) 4.3.1.17 - L-serine ammonia-lyase / Serine deaminase Genomic Order:  627
Name:  ? Thhalv10028795m.g Secondary Identifier:  ? PAC:20197770
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY0-1535 Eutrema salsugineum pathologic  
Esalsugineum PWY-6196 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10028795m.g 0.5kb upstream 0.5kb upstream 2116 true scaffold_3: 4236226-4238341 Eutrema salsugineum
Thhalv10028795m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4236226-4236725 Eutrema salsugineum
Thhalv10028795m.g 0.5kb downstream 0.5kb downstream 2116 true scaffold_3: 4236726-4238841 Eutrema salsugineum
Thhalv10028795m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4238342-4238841 Eutrema salsugineum
Thhalv10028795m.g 1.0kb upstream 1.0kb upstream 2616 true scaffold_3: 4235726-4238341 Eutrema salsugineum
Thhalv10028795m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4235726-4236725 Eutrema salsugineum
Thhalv10028795m.g 1.0kb downstream 1.0kb downstream 2616 true scaffold_3: 4236726-4239341 Eutrema salsugineum
Thhalv10028795m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4238342-4239341 Eutrema salsugineum
Thhalv10028795m.g 2.0kb upstream 2.0kb upstream 3616 true scaffold_3: 4234726-4238341 Eutrema salsugineum
Thhalv10028795m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4234726-4236725 Eutrema salsugineum
Thhalv10028795m.g 2.0kb downstream 2.0kb downstream 3616 true scaffold_3: 4236726-4240341 Eutrema salsugineum
Thhalv10028795m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4238342-4240341 Eutrema salsugineum
Thhalv10028795m.g 5.0kb upstream 5.0kb upstream 6616 true scaffold_3: 4231726-4238341 Eutrema salsugineum
Thhalv10028795m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4231726-4236725 Eutrema salsugineum
Thhalv10028795m.g 5.0kb downstream 5.0kb downstream 6616 true scaffold_3: 4236726-4243341 Eutrema salsugineum
Thhalv10028795m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4238342-4243341 Eutrema salsugineum
Thhalv10028795m.g 10.0kb upstream 10.0kb upstream 11616 true scaffold_3: 4226726-4238341 Eutrema salsugineum
Thhalv10028795m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4226726-4236725 Eutrema salsugineum
Thhalv10028795m.g 10.0kb downstream 10.0kb downstream 11616 true scaffold_3: 4236726-4248341 Eutrema salsugineum
Thhalv10028795m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4238342-4248341 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367741 5261 Brassicaceae View MSA
123832411 5264 Brassicales-Malvales View MSA
124346435 5266 SBM View MSA
124238391 5268 Malvidae View MSA
124063016 5270 Rosid View MSA
123740366 5271 Pentapetalae View MSA
122789012 5272 Eudicot View MSA
122046421 5273 Angiosperm View MSA
121344246 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain