Gene : Thhalv10006628m.g E. salsugineum v1.0
Defline:  (1 of 4) 6.1.1.9 - Valine--tRNA ligase / Valyl-tRNA synthetase Genomic Order:  1802
Name:  ? Thhalv10006628m.g Secondary Identifier:  ? PAC:20185556
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum TRNA-CHARGING-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10006628m.g 0.5kb upstream 0.5kb upstream 6674 true scaffold_5: 10445457-10452130 Eutrema salsugineum
Thhalv10006628m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10445457-10445956 Eutrema salsugineum
Thhalv10006628m.g 0.5kb downstream 0.5kb downstream 6674 true scaffold_5: 10445957-10452630 Eutrema salsugineum
Thhalv10006628m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10452131-10452630 Eutrema salsugineum
Thhalv10006628m.g 1.0kb upstream 1.0kb upstream 7174 true scaffold_5: 10444957-10452130 Eutrema salsugineum
Thhalv10006628m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10444957-10445956 Eutrema salsugineum
Thhalv10006628m.g 1.0kb downstream 1.0kb downstream 7174 true scaffold_5: 10445957-10453130 Eutrema salsugineum
Thhalv10006628m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10452131-10453130 Eutrema salsugineum
Thhalv10006628m.g 2.0kb upstream 2.0kb upstream 8174 true scaffold_5: 10443957-10452130 Eutrema salsugineum
Thhalv10006628m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10443957-10445956 Eutrema salsugineum
Thhalv10006628m.g 2.0kb downstream 2.0kb downstream 8174 true scaffold_5: 10445957-10454130 Eutrema salsugineum
Thhalv10006628m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10452131-10454130 Eutrema salsugineum
Thhalv10006628m.g 5.0kb upstream 5.0kb upstream 11174 true scaffold_5: 10440957-10452130 Eutrema salsugineum
Thhalv10006628m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10440957-10445956 Eutrema salsugineum
Thhalv10006628m.g 5.0kb downstream 5.0kb downstream 11174 true scaffold_5: 10445957-10457130 Eutrema salsugineum
Thhalv10006628m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10452131-10457130 Eutrema salsugineum
Thhalv10006628m.g 10.0kb upstream 10.0kb upstream 16174 true scaffold_5: 10435957-10452130 Eutrema salsugineum
Thhalv10006628m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10435957-10445956 Eutrema salsugineum
Thhalv10006628m.g 10.0kb downstream 10.0kb downstream 16174 true scaffold_5: 10445957-10462130 Eutrema salsugineum
Thhalv10006628m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10452131-10462130 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365312 5261 Brassicaceae View MSA
123827608 5264 Brassicales-Malvales View MSA
124350639 5266 SBM View MSA
124237752 5268 Malvidae View MSA
124066992 5270 Rosid View MSA
123752070 5271 Pentapetalae View MSA
122788218 5272 Eudicot View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain