Gene : Thhalv10006874m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Genomic Order:  678
Name:  ? Thhalv10006874m.g Secondary Identifier:  ? PAC:20188391
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7511 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10006874m.g 0.5kb upstream 0.5kb upstream 4364 true scaffold_5: 5626602-5630965 Eutrema salsugineum
Thhalv10006874m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 5626602-5627101 Eutrema salsugineum
Thhalv10006874m.g 0.5kb downstream 0.5kb downstream 4364 true scaffold_5: 5627102-5631465 Eutrema salsugineum
Thhalv10006874m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 5630966-5631465 Eutrema salsugineum
Thhalv10006874m.g 1.0kb upstream 1.0kb upstream 4864 true scaffold_5: 5626102-5630965 Eutrema salsugineum
Thhalv10006874m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 5626102-5627101 Eutrema salsugineum
Thhalv10006874m.g 1.0kb downstream 1.0kb downstream 4864 true scaffold_5: 5627102-5631965 Eutrema salsugineum
Thhalv10006874m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 5630966-5631965 Eutrema salsugineum
Thhalv10006874m.g 2.0kb upstream 2.0kb upstream 5864 true scaffold_5: 5625102-5630965 Eutrema salsugineum
Thhalv10006874m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 5625102-5627101 Eutrema salsugineum
Thhalv10006874m.g 2.0kb downstream 2.0kb downstream 5864 true scaffold_5: 5627102-5632965 Eutrema salsugineum
Thhalv10006874m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 5630966-5632965 Eutrema salsugineum
Thhalv10006874m.g 5.0kb upstream 5.0kb upstream 8864 true scaffold_5: 5622102-5630965 Eutrema salsugineum
Thhalv10006874m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 5622102-5627101 Eutrema salsugineum
Thhalv10006874m.g 5.0kb downstream 5.0kb downstream 8864 true scaffold_5: 5627102-5635965 Eutrema salsugineum
Thhalv10006874m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 5630966-5635965 Eutrema salsugineum
Thhalv10006874m.g 10.0kb upstream 10.0kb upstream 13864 true scaffold_5: 5617102-5630965 Eutrema salsugineum
Thhalv10006874m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 5617102-5627101 Eutrema salsugineum
Thhalv10006874m.g 10.0kb downstream 10.0kb downstream 13864 true scaffold_5: 5627102-5640965 Eutrema salsugineum
Thhalv10006874m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 5630966-5640965 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373236 5261 Brassicaceae View MSA
123836978 5264 Brassicales-Malvales View MSA
124341727 5266 SBM View MSA
124239418 5268 Malvidae View MSA
124065910 5270 Rosid View MSA
123743713 5271 Pentapetalae View MSA
122796921 5272 Eudicot View MSA
122048855 5273 Angiosperm View MSA
121345281 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain